Gene PHATRDRAFT_54038 details

Gene Information

• Locus tag: PHATRDRAFT_54038
• Symbol: SAS1
• ID: 7196720
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2003996
• End bp: 2006187
• Gene Length: 2192 bp
• Protein Length: 624 aa
• GC content: 48%
• Product: regulator of chromatin silencing
• Protein accession: XP_002177422
• Protein GI: 219111341

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAATGGTTAC AGTAATCCAA GTTCTCCCTC GCCATTTCCA TTCCGCTGTC TACGAGCGAG 
GCTCGCAATT TGAACCATTG CAAACTCTCA TATTTACTTA CGAACGATCG GGCGATGGGA 
AAACGACGCA GCACCGCAAG TAATGGTGAT AAAGGCCTTC ACAAAGGTCA GGCACCCGAA 
AACGAAAAGC AGCAGCCGGC AAAGGCCGAC AGCGACGATG ATGCAATGTA CGGCAAGGTC 
GATCGGTACC ATAACGAACG GGACGAAAAT TTTATGCGAC TCGACCAAGA ATCGAATGAG 
AGTAGTGATG ATGACGAGAA AGAAGAAGCC GTCATGGATC TTGGCTTAGC GGGAGCTAGT 
TCTGAGGAAA GTAACAGCGA TAGTGAATCC GGAGAGGAAG GCGATCGACA GATTGGCAAT 
TCATCGGAGG AGGACGATTA TTTGGACTCC TCGGATGATG AAAATGACGA AGAGATACAA 
ATTGAGGGTG TACGCGACTG GGGGAAGAAA AAATCAAACT ATTACAAGGG TGACACCGCC 
GACTTGGAGA TTGGACAAGA CGAGGAGGAT GCGATTGTGG AAGAAGAGGC CGCGAAAGAA 
CTACTAGCTG CTCGATATGA AGGCATGTCC GAGGACGATT TTGTGCTTCC TGACATTAGA 
GAAGAGAAGC AAGCATCGCC AGGAGAGCTT TTGTCGGCTG CTCGGGATAT TTCAAGGCTA 
TCGAGAAAGG AAAAGCAAAA ACTTCTCGAC AAGCAACACC CGGAGCTCCT TCCACTGCTG 
TCTCACTTTT CTGAGATTGC GAACGATCTT GAAGAGCGTA CGATCGTCGG AACTCGCGCA 
ATTTTTGATG GAGAGGATGA AACTGCTGCG GTAAGTGAAC CAAGGAAGTA CTCATCTCGC 
ATCCATGATA GACTGGAACG GAAGCTCTCG TGCTGGTGAC GTTCTGGTAG AAAAGTGGTG 
CAACAGGAAA CTTTTTGGGA CCATTTTAAT CCTAAGAGTT GGTCAACTCT ATGACTAAGT 
CTCTCTTGGT TGGCGCCCAA CATCTTCACT CACAATGAAT ATTTATTACA CAGGCCGTTG 
GATGTACCAA GTCGGGTCAA CAGTACCTTC TGGTAAAGTC AATGTTGCAG ACCACAGCGT 
CACTAAATCT CGCTATGTAT TTGCTGTTGA AAAAAGAGCA ATCCTCTTTA GAAGACGTGG 
ATTCTGGTCT GATTCAAAGC CACCCTATCA TGGCTCGTAT GCAAAAATGG AATTCTATGC 
TACAAAAGCT GGAGGAACAA GTCGAAGATC GAGCAGATGG TCTGGAAACA CAGTTGAATA 
ATCTCGTCAA AGCCGCTGCT TTAATGTCAG AAGGGCTAAG TGACGAAGAA ATTGAAGAAG 
AGGAAGATGA AGACCACGCC GAGGATAGAG AAGGAAACGA TGAGAGTCTC CGCATTGATA 
TACCGTCGCT GGATTCGACT GACGAAGACT CAGTCGACAC TGAAGAAGGG AGGCGCCATG 
CCCTGAACGA AGCACGATTT GGGCTTCGGA CGAGCGAGAT TAAATCCGGA GCGTCTAGCA 
GTCCTCAGCG CAAAGCTGTG GAGTCCGATC TAGGTGACGA ATTTGAAAAC GATGTTAATA 
ATGCCGCCTC TAGGGCTCTG GCGTCTACCC TTAACTCGAT CGAACAGCGG TCGCTTTCGC 
GCAAACGAAA AGCAGCTCCA AATGTGGAAG CTTTGGACGA ACCACAGCAA GATAATTCTG 
AAATACGACA GGCATTGGAA ATGATGGAAA CCGAGCTTGG TAAAGACCCT GAAACAGAAT 
ATGAATCCAA CGATGACGAT GCAACTGACC CGGAGGTTGA CGAGGACGAT GGGGAAGACG 
AGTTATACAA AGAAGTTAAG AGAAAAAGCA AGTCAAAGAA AGAGCTCAAA AAGAGTTTGT 
ACGCAGTGGC TCCTAAATAT CCTCGATTGG AGAAAGAGAT TGAGGGAGAG CGCGCTGTCA 
GTCGCACCAT TCTCAAGAAT CGTGGCTTGG TTGCCCACAA GAATAAGCTC AATCGCAATC 
CACGCGTCAA AAAACGAGAG CAGTATCGGA AACGACTTAT TCAGCGCAAG GGAACTGTTC 
GGGAGGTCCG CACAGACGAA GGACACAAGT ATTCTGGAGA AGCGACCGGT ATCAAGAGTG 
GTCTTACTCG TAGCCGCAAG TTGGCTCGTT AG 

 

Protein sequence

MGKRRSTASN GDKGLHKGQA PENEKQQPAK ADSDDDAMYG KVDRYHNERD ENFMRLDQES 
NESSDDDEKE EAVMDLGLAG ASSEESNSDS ESGEEGDRQI GNSSEEDDYL DSSDDENDEE 
IQIEGVRDWG KKKSNYYKGD TADLEIGQDE EDAIVEEEAA KELLAARYEG MSEDDFVLPD 
IREEKQASPG ELLSAARDIS RLSRKEKQKL LDKQHPELLP LLSHFSEIAN DLEERTIVGT 
RAIFDGEDET AAAVGCTKSG QQYLLVKSML QTTASLNLAM YLLLKKEQSS LEDVDSGLIQ 
SHPIMARMQK WNSMLQKLEE QVEDRADGLE TQLNNLVKAA ALMSEGLSDE EIEEEEDEDH 
AEDREGNDES LRIDIPSLDS TDEDSVDTEE GRRHALNEAR FGLRTSEIKS GASSSPQRKA 
VESDLGDEFE NDVNNAASRA LASTLNSIEQ RSLSRKRKAA PNVEALDEPQ QDNSEIRQAL 
EMMETELGKD PETEYESNDD DATDPEVDED DGEDELYKEV KRKSKSKKEL KKSLYAVAPK 
YPRLEKEIEG ERAVSRTILK NRGLVAHKNK LNRNPRVKKR EQYRKRLIQR KGTVREVRTD 
EGHKYSGEAT GIKSGLTRSR KLAR