Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_53980 |
Symbol | GEL1 |
ID | 7196403 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1101597 |
End bp | 1103003 |
Gene Length | 1407 bp |
Protein Length | 403 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | gelsolin |
Protein accession | XP_002177218 |
Protein GI | 219110933 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTTC GTGAAAAATT GAACTGGAAA GATACCAATC TTGCTTTGTT CGGTTCAGAC CTTGAAAAGA AAATCAAGGC GGCGGCTGCA GATAGTGAAC CACAATGGAG CAACATTGGT ACATCGGTGG CGTTGCATAT TTGGCGTATC GAACAGTTTA TGGTCAAGCC TTGGCCAAGC AACAAACACG GAAAGGTATG AAAAATGCAG ACGTGACATT AGGAACACCT ATCAAGTTGC GAGACCTTAC AGTGTATAAC TTGGTCGTTT CCTTCCAAGT TTCACAAAGG AGATTCCTAC GTCGTCCTGA ACACATACAA GCCAGAGCCG AGCAAGCCAA AGCTTGCTCA TGATATTCAT ATCTGGATCG GAGACAACAG GTAAGAAGCT GTGTTTCCAA AGAAAACGCT CATTATGAGC TTTCTAAATT GTAGGAGAGT GAATACTGTC TATATGTTCG CTTACTGCGC GGTATACCAA TGCGTCGATA GCTCCCAAGA TGAATATGGA ACAGCAGCGT ACAAAATGGT GGAACTCGAT GACAAGCTTG GCGGTACTGC TGTCCAACAC CGCGAAGTTC AGGGCAAAGA ATCTACCCTG TTTCAAAAAT ATTTTGGGAA TCACTTAACC TATTTGGAAG GTGGCGTTGA GTCTGGCTTT CACCATGTGG AGTGCAGTGC AGCGGAACCT CATTTGTACA AGATCAAAGG AACTCGCAAG TCCGACACAC TGCGCCTAAC CCAAGAGCCT GTACGCCGCA ATTCTCTTAA CACTGGAGAT GTCTTCGTTT TGACGGCGGG GGAAGAGGCC GTCTGGATTT GGGTGGGCAA AGAATCGAAT CAGGACGAAC AAGCGAAAGG TGTGGAAGTG GCACAGGCCT TCTGCAAAAA AGGAAACGTG ATTGTCTTGA ATCAGGGCGT CAACGACAAT GAAAAAGAGG CCACCGAGTT CTGGGCCTTC TTACCGGGCA AAGTTGCAGT TTTAGGACCA ATCAAAAAGT CGGTTCGGGT ACAGGCTGCC GACGAGAAAG ACAATAAAAG CCGAGCTTTT GTACCGGTCC TTTTTCAGAT ACCGGAGCAA ACCGGTGGCA AGCTTCGCAA AGTGGCCACC GCCAAGAAGC AACCGGTCGG GCCAACCCGG GACATGCAAT ATTTGTTGCC GCGTTCAACG TTGCAGAGCA AGCACGGCTA TTTGCTAGAT ACAGGCTTTC ACATTTTCGT TTGGTTGGGC AGCCAGGCAC CTACTATCTG TAAGGCAAAT GCTATGCCTC AAGCGCACAT GTACTTTTCG TCTTTTCGAC GCCCCTTGTT GCCTTTGACG GTTGTCAAAG AACGACAGGA GACGGATTTG TTCCAGGAAC GATTTCACGA AGCTGGTAGC GCGGGTTGCG CTTGTGTTCT CATGTAG
|
Protein sequence | MNVREKLNWK DTNLALFGSD LEKKIKAAAA DSEPQWSNIG TSVALHIWRI EQFMVKPWPS NKHGKFHKGD SYVVLNTYKP EPSKPKLAHD IHIWIGDNSS QDEYGTAAYK MVELDDKLGG TAVQHREVQG KESTLFQKYF GNHLTYLEGG VESGFHHVEC SAAEPHLYKI KGTRKSDTLR LTQEPVRRNS LNTGDVFVLT AGEEAVWIWV GKESNQDEQA KGVEVAQAFC KKGNVIVLNQ GVNDNEKEAT EFWAFLPGKV AVLGPIKKSV RVQAADEKDN KSRAFVPVLF QIPEQTGGKL RKVATAKKQP VGPTRDMQYL LPRSTLQSKH GYLLDTGFHI FVWLGSQAPT ICKANAMPQA HMYFSSFRRP LLPLTVVKER QETDLFQERF HEAGSAGCAC VLM
|
| |