| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_53961 |
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| Symbol | |
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| ID | 7196307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 675017 |
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| End bp | 677388 |
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| Gene Length | 2372 bp |
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| Protein Length | 668 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | RTX toxins and related Ca2+-binding protein |
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| Protein accession | XP_002176627 |
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| Protein GI | 219109747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAT CGATGAACGC AACTCCCGAA GAAGAGGAGA CGCCGCCGCC AAAGTGGAGG
AGAAAGGAAG AGGAGGAAGA GGACGTTGGA TGCCAGCCTG TTGGCTCATG CCCTCATGGA
TCCGTCGGGA TCATGGCGAT CCTTGTGTCA ACTGGTCTTT TCTGTTTGTC CGCTGCCGCA
GCTGGTAGTT GTACCTTTGT TCTCGTCGAC ACCGTCGAAA GAAATGGTTT AAGCTTCGAA
GATCGTAGAA TAGGGCTGTA TCGGTTTGAA GATAAGCGTA CAGACTCCTC CTGTTTATTT
TGGACGTCTG GTGAGAACGC CGATCGTGTG TACAATAGTC ACTGGAGTGC TGCTCGTGCC
CTTGTCTGGG CCGCCTTGAT CCTAACGCTC GTGAGCGCAG TCTTTCTATG CAGTGCCAGC
TGCTACGCGC ATCCCAGAAA GCTCTTCCAA TCGCTCTCTT TTTTATTTAT TTTCAACTCT
ACGCTGTTTG GGATGTCCTT CATCGTCTTT GCGTCAGACA TTTGTCAAGA AGCTGGATCT
TGTGCCATGA GTACTGGAAG TATAATGATG GTTGCAGTTG CGGTTCTCTG GTTATTGACG
TCCTTACTGC TGCTCTATAT TCCTTCTTAT TATAAGAACC CGCGCTCTCC AAGGGAGAAG
CCTCGGATTC AATTTAATTC GACACAAAAA ATCTGGTGTA TGGCTGCCTT GATTGCTGTC
TTACTTATCG GACTAGTCAA CGGTTTAATA ATTGGACAAA GCGATGGTTT CTCTGAGAGG
AATGGAACTG ATGTTGTCTC ATCACCAGTC CCGGAGATCT CCAGCCCTCC GCCAAAAAGT
TTTCCAGGCT CCTGGGATAC TATTGCCATT GTTCCTGGCG GTTACCAAGG GAACGCCATT
TCACTGGCTC CTGGTGGGCG GGCAATCGCG GTGTCTACTT CGTACAATCC AGGCCGTCTC
TCGTTTTTCT ATCAACCTGA AAATAGTCTT ACGTGGACAG TCCTGGGTGA GACGGGAGGA
CACATCGGAC CGCCGAGTTT CGGTAGGTCC CTCGCGCTTT CCGATGTTGA CGTTTATGCT
GTCGGTACTC CAGATTTTGC TGTTGATGGA GTAGCATTTG GACGAGTGGA TGTTTGGTTC
TATGATCGTG ACGCAGAAGC TTGGTTGATA GACGGTTTAC TGATTGGCAA CAAGCCAAAC
TTTCATTTCG GCAGCGATGT GGCGATTACG GCTGGTGCCG ACTATGCGGC AATTACTTCA
ACTTCTATGG AAGACGGCGC ATCGGCGGTC CAAGGCTATG CATATAGCGA AGAGTTGTCG
TGGGTTCCTA TCGGCCAGGA AATTTCCCTT CTCCAGTCCA GTCCGGCAAC AAGTGGTTGG
AATGCGACTT CGTCATTGAT TATTTCTCCA TCGACTGGGG TGGTCACATT GTCGATCGGA
ATTCCTATTC AGGATATTGG AGGGATGGTT ATCGTGTGGG ATTACCAGCC TGCAAATGAT
GTATGGGTAC AGAGGGGCTC GACTATTGAT GCGAATGCTG TCGCCAGCTC AGACGACGGC
GACGACTTTG GATATTCTGT TGCTTTAAGT GAAGATGGCA ACGTTCTCGC CGTGGGTGCC
CCCCAGGGCG GAAACAAATC GACGGGTAGC GGTGGTCACG TACGAATCTT CTCATTCCAA
CCAGGGACAT GGCAGCAAGT TGGGCAAGAT TTGACTTGTG GATTGAACGC AAGACGTTGT
GGGGAATCCG TTAAACTGAC ATTTGATGGA AAGATGGTTG TGATTGGAGA CTCTGGGTTT
GATGGTGGTC GTGGACGCGT TATTGTTTAT CAGATTGACG ATTTTGCGGG CGAGTGGTAT
CAGTTCGGAC CCGTCATTAA CGGGGAATCT TCTGGTGGTG TTGGCGCAAA AGTTTCGATT
TCTCGTTTTG GAGAACTTGT GGCCTACACT GATGCTACCG AGGGCTCCAG AAAGGGCGTG
TTGGTAGAAT ACAACCCAGA GGAATAGCTT CAATTAGTCA TTGTCCATCG ATGTGACGGT
CTGCAGAATT TATGTGCGTA CTTTTTTGTC GGCGCTGCTA CTTTCTGATC TTATTGCGCA
CGCAATTGCT TTACGGTATC TGTATCGTTG GTGAGTTGGA ACTCTGCTGT GGTCCTTCAC
AGATGCATAC CGATCAACTG TATAGACATG ATTGTTCCCC CAGAAAGCGA GGCAATGCTA
GTATCGAGTG GCTAGCCATG TGGGTCCGAC ATTCCCGAAG ACTCGACAAA TGACGCACTA
TTTGCCTTAA TGAAGTTCGA GCTGCAAGAT TATGTGTGTG TTTTCCATTG GATTGACACA
TATGTGATGC CGATTAAGGC CTTCACTGAT GC
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| Protein sequence | MAVSMNATPE EEETPPPKWR RKEEEEEDVG CQPVGSCPHG SVGIMAILVS TGLFCLSAAA
AGSCTFVLVD TVERNGLSFE DRRIGLYRFE DKRTDSSCLF WTSGENADRV YNSHWSAARA
LVWAALILTL VSAVFLCSAS CYAHPRKLFQ SLSFLFIFNS TLFGMSFIVF ASDICQEAGS
CAMSTGSIMM VAVAVLWLLT SLLLLYIPSY YKNPRSPREK PRIQFNSTQK IWCMAALIAV
LLIGLVNGLI IGQSDGFSER NGTDVVSSPV PEISSPPPKS FPGSWDTIAI VPGGYQGNAI
SLAPGGRAIA VSTSYNPGRL SFFYQPENSL TWTVLGETGG HIGPPSFGRS LALSDVDVYA
VGTPDFAVDG VAFGRVDVWF YDRDAEAWLI DGLLIGNKPN FHFGSDVAIT AGADYAAITS
TSMEDGASAV QGYAYSEELS WVPIGQEISL LQSSPATSGW NATSSLIISP STGVVTLSIG
IPIQDIGGMV IVWDYQPAND VWVQRGSTID ANAVASSDDG DDFGYSVALS EDGNVLAVGA
PQGGNKSTGS GGHVRIFSFQ PGTWQQVGQD LTCGLNARRC GESVKLTFDG KMVVIGDSGF
DGGRGRVIVY QIDDFAGEWY QFGPVINGES SGGVGAKVSI SRFGELVAYT DATEGSRKGV
LVEYNPEE
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