| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_53935 |
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| Symbol | Rpe |
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| ID | 7196672 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 189466 |
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| End bp | 190618 |
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| Gene Length | 1153 bp |
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| Protein Length | 260 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | plastidic ribulose-phosphate 3-epimerase |
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| Protein accession | XP_002177037 |
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| Protein GI | 219110571 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.014305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACACATCCT ACCTATAGAT ATATAGTCTC ATCAACGAAC GAAAGCTACC GTCCATCATG
AAGTTCACTA TTGTTTCCTT GGCCGCCGTT GTTGCTTCGG CTTCCGCCTT TGCTCCTGTA
AGTGTACCCC CCGTTTCGAC GGGGAATCTC CACCGAGGTG TCCATCCAAC TGCAGCTGTT
CGGCGACAAC CTCGCGTTCG TAGGATAGTG GAATGACACA GGTCGTGCTC GATTTGCCGT
ACTCTGCTCC TTGTCATTTC TATTCAATCA CTAACACACA CACAAATGCA CATGGAAATA
TACAATATAT ATATGTATAC ACACAAACAA TCACACTGGT ACGGCTAGGC CACCAAATCT
GTCCGCTCAG TGAGTGCCCT GAACGTTTGG GGCGACAAGG ACTACCTTAT TGCCCCTTCC
ATTCTGTCGG CTGACTTTGC CCGTTTGGGT GAAGAAGTCG ACAATGTTCT GGAAGCCGGG
GCCGATGTCG TACATTTCGA CGTCATGGAC AACCACTACG TCCCCAATTT AACGATTGGA
CCCATGGTGT GCAAGGCATT GCGCGACCAC GGCGTCACCG CTCCCATTGA TGTACACTTG
ATGGTGTCTC CCGTCGACGC CGCCATTCAA GACTTTATCG ATGCCGGTGC TTCCTATATT
ACCTTCCACC CCGAAGCCAC CAACCACGTC GATCGTTCTC TGCAATTGAT CAAGAACGGG
GGCTGCAAAG CGGGCTTAGT CTTCAACCCC GCGACCAGTC TCGATGCCGC CAAGTTCGTC
ATGGACAAAC TAGACATTAT TTTGCTCATG AGCGTCAACC CCGGATTCGG CGGTCAGGCA
TTTATCCCCG CTGTCCTGGA TAAGGCCCGG GAAGCACGCC AACTGATTGA CGATGCCGGT
ATTGACTGCC GTTTGGAAAT TGATGGTGGA GTCAAGACGG AAAATATCAA GGAAATTAAG
GATGCCGGTG TCGACATGTT CGTGGCTGGC AGTGCCATTT TGAAGGAACC ACGAACGCTC
GAAGCCTACA AGGAGACGAT CGATACCATG CGCGCCGAGC TCGCCAAGTA AAGACCGACG
GCTACCAGCT TTCCATAAAA TGTAGAGGTA AATGGCACGT GGCCGTGCGT TAGCAATCAC
TATTCTACTG CTG
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| Protein sequence | MKFTIVSLAA VVASASAFAP ATKSVRSVSA LNVWGDKDYL IAPSILSADF ARLGEEVDNV
LEAGADVVHF DVMDNHYVPN LTIGPMVCKA LRDHGVTAPI DVHLMVSPVD AAIQDFIDAG
ASYITFHPEA TNHVDRSLQL IKNGGCKAGL VFNPATSLDA AKFVMDKLDI ILLMSVNPGF
GGQAFIPAVL DKAREARQLI DDAGIDCRLE IDGGVKTENI KEIKDAGVDM FVAGSAILKE
PRTLEAYKET IDTMRAELAK
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