Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4761 |
Symbol | |
ID | 7196298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 625340 |
End bp | 625828 |
Gene Length | 489 bp |
Protein Length | 163 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177126 |
Protein GI | 219110749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000849222 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTGCCATGG ACTGCGAAAT GGTCGGCGTT GGACCCCACA GATTTTCAGT GCTAGCCCGG GTTTCCATTG TCAACTTAAG AGGGGATACT ATTTTTGACT CTTATGTTCG AGTCGACGAA AAAGTGACTG ACTATCGGAC CTGCGTTTCA GGAATTCGGC CTGAAAATCT CAAGTCAGAG AAAGCCATTG CCTTCGGGAA GTGTAGGGCG AAAGTTATGC AAGTTCTGAA AGGAAAGATC TTAGTGGGAC ATGCACTTAA AAACGATCTC AAAATCCTCA ATCTACATCA CCCTTGGTAC AATACTCGTG ATACCTCCAT GTATGGACCG TTCATGAAGA TGTCGCACAA GGGGATTTGG AAACCCCGCC GTTTATCTGA GTTGACTCGA GTAGTTCTAG ATACTAGTAT TCAGCAGAAA GAGCACTGCT CCGTGGAAGA CGCTCGGGCG GCAATGAGTC TTTACTGCTC TGTTAGAGAC GAGTGGGAT
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Protein sequence | VAMDCEMVGV GPHRFSVLAR VSIVNLRGDT IFDSYVRVDE KVTDYRTCVS GIRPENLKSE KAIAFGKCRA KVMQVLKGKI LVGHALKNDL KILNLHHPWY NTRDTSMYGP FMKMSHKGIW KPRRLSELTR VVLDTSIQQK EHCSVEDARA AMSLYCSVRD EWD
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