Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43270 |
Symbol | |
ID | 7196979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2492742 |
End bp | 2493876 |
Gene Length | 1135 bp |
Protein Length | 321 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177532 |
Protein GI | 219111561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCACCGGTA AAGATGCAAG CTAACTGTAA CCACAGGCTC ATTCTGGTCT GGGACAGTTG GAAAGCAAGA GGACTTATTA GTTGTTACCT TTAGTAATCA CAAACAGAAT CTGGTTGCAG CCTCGTCGTC TCCGTACAAT CTTGAGCGAT CAGGAATTGC ATCCATATCA TGAGGACTTC TTGGCTCACG AGACTTTCAA CTGCGTTCCT CGCAATTTCA ATCATCATTC CCCCCGTCTG CAGTTTTCAG TCTCCTTTAG TGTCGTCACG GACGCAAGAA GGTCGCCTAA CGCAACATTC TGCAATTCGG CTCCAAATGA GTGATAACAA CAAGAGTAAC GGCAAGACCG AGTACAGTCG AGAGCTATAT TTGCGGGAAG AAGCCGAGTC ACCCTTTCGC AAGGTCCGAT TCTTTTTTTA TTATTCTCTG GGAGCAGGGG CATTGACGAG TTTGGCCGTA TCCGCATCCC GGGTCGCCGC CGCCTTGGCG GGTATCAACA CAGATTTGCT TCAAGAAAGT GCGATCAATG TGGGAGTTGA TGTGGCTGGC CTGGTCGTCC TTGGTTTGGC CTTTCAGAAA GACAAGGAAG CGCAAGACTC TCGATTGAAA CGAGCCTCGA AAGGCGCCGA GCTCGCTCGG CTTACGGTGC GAGGGTCCAA ATCGATCATC ACCGGGGATC TTCCGAATGT GAACGAAGCG TCCGAAACTT TTACCACATC TCTCGCAAGT ATGAGACGTG GCAGGGGTAT CGAAAAGCGG GTTGTAATTG CTGCAGCCGG CAAGGAAAAG ATCGCTGAAA TTCTCGAAGA CTCGATCAAG CTGGCAGACT CACTCGTCAT GAGTGATTTA CTGATAGTTC CTGTTGAAAT GCCTCAGGGC CTCTCCCCAA ATGTAGAAGG CAAGACTGTA CCAGATTGCG TGGCTCTTCC CGTCGGCAAT GGATGGAAGG CCATGGTCAA CGACGAAGCC GAAGAAGCAA TCAAACAAGG TGTAAATATC GAGAAGGAGG GCATTTGCAT TATTCTTAAA AAGAACGGTC GCGTTGGGCA AAGGACGAAA GGTATTTTCC TGGGGAAGAT GGTCGGCGAA GTCGAGGAGC GTCGGGATCT AGGCTTGGAT GTCAAAAATA TTTAG
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Protein sequence | MRTSWLTRLS TAFLAISIII PPVCSFQSPL VSSRTQEGRL TQHSAIRLQM SDNNKSNGKT EYSRELYLRE EAESPFRKVR FFFYYSLGAG ALTSLAVSAS RVAAALAGIN TDLLQESAIN VGVDVAGLVV LGLAFQKDKE AQDSRLKRAS KGAELARLTV RGSKSIITGD LPNVNEASET FTTSLASMRR GRGIEKRVVI AAAGKEKIAE ILEDSIKLAD SLVMSDLLIV PVEMPQGLSP NVEGKTVPDC VALPVGNGWK AMVNDEAEEA IKQGVNIEKE GICIILKKNG RVGQRTKGIF LGKMVGEVEE RRDLGLDVKN I
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