Gene PHATRDRAFT_43270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43270 
Symbol 
ID7196979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2492742 
End bp2493876 
Gene Length1135 bp 
Protein Length321 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177532 
Protein GI219111561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCACCGGTA AAGATGCAAG CTAACTGTAA CCACAGGCTC ATTCTGGTCT GGGACAGTTG 
GAAAGCAAGA GGACTTATTA GTTGTTACCT TTAGTAATCA CAAACAGAAT CTGGTTGCAG
CCTCGTCGTC TCCGTACAAT CTTGAGCGAT CAGGAATTGC ATCCATATCA TGAGGACTTC
TTGGCTCACG AGACTTTCAA CTGCGTTCCT CGCAATTTCA ATCATCATTC CCCCCGTCTG
CAGTTTTCAG TCTCCTTTAG TGTCGTCACG GACGCAAGAA GGTCGCCTAA CGCAACATTC
TGCAATTCGG CTCCAAATGA GTGATAACAA CAAGAGTAAC GGCAAGACCG AGTACAGTCG
AGAGCTATAT TTGCGGGAAG AAGCCGAGTC ACCCTTTCGC AAGGTCCGAT TCTTTTTTTA
TTATTCTCTG GGAGCAGGGG CATTGACGAG TTTGGCCGTA TCCGCATCCC GGGTCGCCGC
CGCCTTGGCG GGTATCAACA CAGATTTGCT TCAAGAAAGT GCGATCAATG TGGGAGTTGA
TGTGGCTGGC CTGGTCGTCC TTGGTTTGGC CTTTCAGAAA GACAAGGAAG CGCAAGACTC
TCGATTGAAA CGAGCCTCGA AAGGCGCCGA GCTCGCTCGG CTTACGGTGC GAGGGTCCAA
ATCGATCATC ACCGGGGATC TTCCGAATGT GAACGAAGCG TCCGAAACTT TTACCACATC
TCTCGCAAGT ATGAGACGTG GCAGGGGTAT CGAAAAGCGG GTTGTAATTG CTGCAGCCGG
CAAGGAAAAG ATCGCTGAAA TTCTCGAAGA CTCGATCAAG CTGGCAGACT CACTCGTCAT
GAGTGATTTA CTGATAGTTC CTGTTGAAAT GCCTCAGGGC CTCTCCCCAA ATGTAGAAGG
CAAGACTGTA CCAGATTGCG TGGCTCTTCC CGTCGGCAAT GGATGGAAGG CCATGGTCAA
CGACGAAGCC GAAGAAGCAA TCAAACAAGG TGTAAATATC GAGAAGGAGG GCATTTGCAT
TATTCTTAAA AAGAACGGTC GCGTTGGGCA AAGGACGAAA GGTATTTTCC TGGGGAAGAT
GGTCGGCGAA GTCGAGGAGC GTCGGGATCT AGGCTTGGAT GTCAAAAATA TTTAG
 
Protein sequence
MRTSWLTRLS TAFLAISIII PPVCSFQSPL VSSRTQEGRL TQHSAIRLQM SDNNKSNGKT 
EYSRELYLRE EAESPFRKVR FFFYYSLGAG ALTSLAVSAS RVAAALAGIN TDLLQESAIN
VGVDVAGLVV LGLAFQKDKE AQDSRLKRAS KGAELARLTV RGSKSIITGD LPNVNEASET
FTTSLASMRR GRGIEKRVVI AAAGKEKIAE ILEDSIKLAD SLVMSDLLIV PVEMPQGLSP
NVEGKTVPDC VALPVGNGWK AMVNDEAEEA IKQGVNIEKE GICIILKKNG RVGQRTKGIF
LGKMVGEVEE RRDLGLDVKN I