Gene PHATRDRAFT_43235 details

Gene Information

• Locus tag: PHATRDRAFT_43235
• ID: 7196956
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2404585
• End bp: 2406700
• Gene Length: 2116 bp
• Protein Length: 618 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002176973
• Protein GI: 219110443

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAGGTTTTTA CCTGTGTCGC ACAAGAAATG GCAATATGCG TCGAATCCTG AAACTACCAA 
CGCCCAAACA GGCGGCAATC TTCTTTCTCT TGGTCGCGGC GTTCCTTGAC CCAGCGATCT 
ACGCGGCGCA AGGTTTGACC GCGGACTCGG CGATCCTGTT AACCTCGTCC ACCTCGTCCT 
TGCGTTTCCA CTCCTCCCTA CCGCCCCGGC AGAAACGCAC GGATCGACCG GCACGCGTCC 
ACCGATCGTA CGGCGATCGC TTTCGCGATG ACGATGATGT CCAAGGCGAT AGATTGGTCC 
CCAACGACGA AATTTCTCGC CGATTGAGTA CAGATCGACC CACGCTCTCT CGCACAGAAG 
TTGTGGGACC GCCCATTGTA CCGAGCAAAC CCAAAATTGT TGTACTGGGG GCATCCGGAA 
AAGTGGGAAG ACTCGTCGTC CAACAACTAC TCGAATCTAA TGTTGACATG ACTGTGGTGG 
CCTTTGTAAG AGACTACGAT AAGGTACGTC TGATGCCTGC GAAAGTGTGT GAACGAGGCC 
CGACCCCGAC GGTTCGCGTT GTTCGAGTGG AGTACCTACG GATGTCTTAC CGCATTTTAT 
TGACCTGGAT TCGAACTATG TTTTCTACTG TTACTCTAGG CATGTCGTGT ATTGTATGAT 
GATATCCTGG TAGCCAAAAG AAGTAAAACC CGTCCGGGAG GAAAGGGGGA ATCACGGGGT 
CCCAACCTTC AAATCGTGGA AGCCGATTTG GTACCTCCGG AGGAACTTCC AGGGTACGAG 
GATGAAGAGG AAACATCTTG GAGAAAACGG GCAAAGTCGG CCGCCTCGTT CTACAGAAAT 
TCAATGGAGA ACTATGACGA TCGCGATCAA ATTTCGGAGG GTGTGCAAGT GAACGAAGCC 
TTGCAAGAAG CGGTGAAGGG ATGCACTGCT ATCATAAGTT GTGTTGGATC GGTGCGTCCA 
ACGAATCTGT GGACAGATAT TTTGGAACGA CCCATACTAC GCCTACTGCG CAAGGATGTC 
AGTCGTTGGT GCAAGGATGC CCGACACCCG TACTACGTCA ATTTCGCGAG CACGAGAAAG 
GCCCTAAACT ACGCGGAGCG GGAACAGCTA CGCAGGGAAG CCGCCTTGAC CGTTAGTGAT 
AGCGATGACA CCCAAGCCTC TACAAAAGAA AAGGAGTCGG TACCACGCAT TCGATTCATT 
CGGATTTCCG ACTTATGCTT AGCGTCACAG CCTTGGAGTT TTGTCCCGCT AGTGACCAAC 
ACGATGCATT CAATGGTCTT TCGGTATCAA GACATGGCGG AGCGCTTATT GGAGGCCAGC 
TCATTGATAG AGACAGTTGT GCTACGACCT GGAGATTTGG TAGACGAAGA TCGCGACGTC 
CAGACAACTT CCTTACAAGT CTGTCCCAGT GGTCGACTCC CATCACCATC GAGAGTGGGC 
CGAGATGACG TTGCTGCTTT GGCGGTGTCT GCAGCATTGT TCGATTCCAA AACCTCTTCC 
AAAGACGACA AAAGTTCTGA AGCAGGGGAG CATGAAATCG AGGAGCCCTT CCATTACACG 
TTGGCGGTGC GGTGGGCTGG CGAAGATCTT TCGCCTTTCC CGGCTCAGGG TCGATTGAAA 
GACGGAATGC CTGATGCCAA CTTGTGCCTA CAAGATGCGC TTCGGAAGCT GAGCAAAGAC 
CGAGCGAAAC CGAGTCTGCA GAGAACCAAA CGGCGTGCAG CTTACCCAGA AACCGTTTTG 
AGATTCGCGA CAACGTTGCA AGCTTCACGC CGGAGCAAAC CCTATGGCGT CTGTGTAGCC 
GTACCACTCT ATTTGATTTT GGCACTCTTT GCGCGTTCCC TATTTCACTC TGTGGCATCC 
TTCTTTCCGG GACAGCGATG GATACGGCCT GTATTTACTC CAGTGTGGGA TTTCATCGCG 
ATGAGCATTG CGGCGGTGAT GGCTCGCGTT GGTGTGCTGT TCCAGGGCCG ACTGCCAAGC 
TGGAAATGGG TCAGCTGGCG GGCCAACCCC AAATACATTT CGTTTTGAAA ATACATCAAT 
TTTTGCTACA TTTCATCCTA TCTCTATGGA ATTTCTGGCG TGCTAATCTA TTCGTAACGG 
AATTGTAGTG GTTGGC 

 

Protein sequence

MRRILKLPTP KQAAIFFLLV AAFLDPAIYA AQGLTADSAI LLTSSTSSLR FHSSLPPRQK 
RTDRPARVHR SYGDRFRDDD DVQGDRLVPN DEISRRLSTD RPTLSRTEVV GPPIVPSKPK 
IVVLGASGKV GRLVVQQLLE SNVDMTVVAF VRDYDKACRV LYDDILVAKR SKTRPGGKGE 
SRGPNLQIVE ADLVPPEELP GYEDEEETSW RKRAKSAASF YRNSMENYDD RDQISEGVQV 
NEALQEAVKG CTAIISCVGS VRPTNLWTDI LERPILRLLR KDVSRWCKDA RHPYYVNFAS 
TRKALNYAER EQLRREAALT VSDSDDTQAS TKEKESVPRI RFIRISDLCL ASQPWSFVPL 
VTNTMHSMVF RYQDMAERLL EASSLIETVV LRPGDLVDED RDVQTTSLQV CPSGRLPSPS 
RVGRDDVAAL AVSAALFDSK TSSKDDKSSE AGEHEIEEPF HYTLAVRWAG EDLSPFPAQG 
RLKDGMPDAN LCLQDALRKL SKDRAKPSLQ RTKRRAAYPE TVLRFATTLQ ASRRSKPYGV 
CVAVPLYLIL ALFARSLFHS VASFFPGQRW IRPVFTPVWD FIAMSIAAVM ARVGVLFQGR 
LPSWKWVSWR ANPKYISF