Gene PHATRDRAFT_43233 details

Gene Information

• Locus tag: PHATRDRAFT_43233
• ID: 7196954
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2400287
• End bp: 2402333
• Gene Length: 2047 bp
• Protein Length: 517 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002177507
• Protein GI: 219111511

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.479677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAGAGAGGG AAGCTTTGGA CAACGAGTTT TCTCCCGTGT CGTGCGTGAT ATATAGTTTG 
GTTCGTTGGG GTATTGTATA TCTGTGCTCT CGAGTGTCCT TGGTGTCACT TATTCACACA 
TACACATCGT ATTTTATCGT AGTCTACGGC GTTCACAATG AGGATTTGCA TGCGCAGTCA 
GAGTTACTCG TCGCTCGTGG TGGCTAGTAT GGTAGTGTGT ACGGCGGCGT TCCAGACGTC 
CGTCGTTTCG GTCCGCCGTC ATTCGCCGCT GTCTTCGACG ATTGACGGTG TGGATCGGAG 
CGAAGCGGTA GCCAAGTTGG AACGCGCCGC GGAGCTATCG GACTTTCTCG CGCAAGCCTA 
CGAAGACAAG GTCAAGGCCA TCGAGACGGT GGAGAAGCAG AATCAAGCCG AGATCGACGC 
CTTGAAAGCG CAGATCGAAT CGCTCCAGTC GCAGTCCAGC GGAGCAGCGT CCAAGCCCAG 
CGCTCCGCCC AAGATCACCG GAGATCTCGC CAAACTATCC AACGATGACT TGAAGAAGAA 
ACTTCAGGAG TACGAAGAGT TCATGGCCAA AACTATGGCC GATGCCGATC CCTCCATCAA 
GGCCGCGATA CAGAAGAAGC AAGCCGAAGC CGCACAACAG CAGCAACAAC AACAACAACA 
GTCGTCCACC ACTACCACAG CGACTGCTGG AGCGACTACC AGTGGCACTG GTGGTGTCTT 
GGGTACCGAG GATCTGCTTT CGGTGGGTGC CGTTTCGGCA CTCACCGCCG TCGCGACTTC 
GGTCATTCTC GACAACACGC GTCGCCAGAG TTTTGGTAGT ATCGTGGCCG GTGTCAGTGC 
GCCTCTCGTC GCCGGAAATT CGGCACCCGA ACCCACAGAA ACTCCAGCTC CAGCTCCCGC 
AACCGTCGCT CCCCCGGCAC CCGTGGTGGT CGATTTGTCC CAGTTTGAGG TACGTACTGT 
GGCGCAGTTG CGTGACTTTC CCTGTGTTAC TTTTACTGTT GTTGTTGGTC CTACCCGACA 
AAAGTAGCGT ACGGTAGTAA CGGTAAAACG GAATGGACGT ATCTGGACTC ACCCCGCCGG 
TTGCTCTGTC TCTTGTTACG CCACAGACCA CCATGGCCAA AGTACAACAA GCCTTTCCCG 
GAGCCGCCAC CAACGACCAG CTCGTGGCCA AGACCAAAAG TGCACTCTCT CGATTTGGAT 
TCGGTTCCAA TTCACTAGTC GCTACTTCCT TTTGCAGCGA CGAAGTCAAC CGTCCCCTCG 
AGACAGACTT TGCCAAGGAA TTCAAGGACA CCTTCAGTCT CGGAGGCCTC GCCGGGTTCC 
CCTTTTCGGG AGTCACCGGG TTCGGTGCCA TGGCCAAACA CATACCCGAC GGTGGCTCCT 
GCCTCGTCGT CTACGGACCC CACGTCGGAG TCGATCTAGA CGGCAACGTC GGAACCGTCA 
ACCGACGAGG CCGCGAAAAG GGAGGAACTT GCTGCGGCAG CGCCGTCGCC GCCGCCGGGT 
ACATCAGCAA AGTTTTCAAT GGCGAAGCCG ATCCGGCTCC CGCCGTCCCG GAAAGTTCCA 
TGGACGCCCA ACAACTCTAC GTCGGAAACA TGCTCCTGCC CTACGCCGAA CGCATCGGTA 
ACGCCCAGGA CGCCATGGTC GAACTACCCT ACGCTACCTA CGAACCCCTC GACGATCTTA 
TGCAGAAGAT TGTGGCCAAG GGATGCGGCA AGGTCGGCGG CGACGGTAAA ATTGCCCTGC 
TCGGAGGCTT GCAAATTAAT ACCCCTGCCG GGTGCCCCGA CTACTTTTTG CCCTTGCGCT 
TCGAAGTCCG GGACAATCAA AACAACGTTC TGGACAATCT ACTGTACGAA AAGCGAGCGT 
TGTTCTAACT GTGAGCAAAC GAGCCCAGTG TGTTTATCGT TTACGATTGG ACCGCCCTTG 
GTCCATAGTC CGTAGTTCCC GGCGCGTGGG ATGGGCGATT GACGACTCTG GATGGTCCCC 
TCGCTCAATC CCACGGCCGG AGTATAACAG TTCCCTCTAT TTCACTCGTA GTGTGCTTTG 
CTAGAGT 

 

Protein sequence

MRICMRSQSY SSLVVASMVV CTAAFQTSVV SVRRHSPLSS TIDGVDRSEA VAKLERAAEL 
SDFLAQAYED KVKAIETVEK QNQAEIDALK AQIESLQSQS SGAASKPSAP PKITGDLAKL 
SNDDLKKKLQ EYEEFMAKTM ADADPSIKAA IQKKQAEAAQ QQQQQQQQSS TTTTATAGAT 
TSGTGGVLGT EDLLSVGAVS ALTAVATSVI LDNTRRQSFG SIVAGVSAPL VAGNSAPEPT 
ETPAPAPATV APPAPVVVDL SQFETTMAKV QQAFPGAATN DQLVAKTKSA LSRFGFGSNS 
LVATSFCSDE VNRPLETDFA KEFKDTFSLG GLAGFPFSGV TGFGAMAKHI PDGGSCLVVY 
GPHVGVDLDG NVGTVNRRGR EKGGTCCGSA VAAAGYISKV FNGEADPAPA VPESSMDAQQ 
LYVGNMLLPY AERIGNAQDA MVELPYATYE PLDDLMQKIV AKGCGKVGGD GKIALLGGLQ 
INTPAGCPDY FLPLRFEVRD NQNNVLDNLL YEKRALF