Gene PHATRDRAFT_43232 details

Gene Information

• Locus tag: PHATRDRAFT_43232
• ID: 7196953
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2397734
• End bp: 2399790
• Gene Length: 2057 bp
• Protein Length: 568 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002177506
• Protein GI: 219111509

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.332386
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCAAC GACTCCAAGC TGTTCTCTTT TTTTGGGCTT CCAAGAGAGG TATGCCACTC 
ACTGTCATCT TCCCATTTCC TGTGTATCCG CTTCCGATCC GCCACCGACC GAACTCTTAC 
AAACAAAGAT TCATTGAACC TTTCAAAGGA CCTCGGTGCC GACATGGAAG AGGCTATGGA 
AACAGGCGAC ATTTTCCTCG GCACTGTCGT CGCTGTCTTG ACAATTGTCG GGATCAGTGT 
AACCATTAAC CTGTTGAAGT TCTTGTGGAG ATCGTTCGCC GCTCAGGTAG GTTCAACGAT 
CTATCCCTGA ATAGTCCGGT ACCGACGGCA CTTTCTCACA TCTTCTATTC CAATGAATTT 
TGTACAGCCC ACAACGGCCA AGATCCGTCA GGTCTTCCCG GGTGCCCAGA CGAACGATCA 
GCTCGTCGAA ACGATCAGAT CCAGTCTCGA AAAGTTCGGA TTCGGAGAAA ACTCCCTCAT 
TGCTACCTCC TTGTGTTGCG ACGAAGTCAA CCGTCCCCTC GATAAGGCTC TGTCGGAGAC 
CTACGGTAGC TACTTCTCCA TGGGAGGTCT CGCTGGCTTC CCCTTTGGAG GTCTGACCTC 
CTTCGGAGCC ATGGCTGCGC ACATCCCCGA CGGGGGCTCT TGCGTTGTGG TGTACGGGCC 
TCACGTTGGT GTGGACTCCA AGGGTAACGT GGGTACCGTT GAGCGCCGCG GACGTCAGAA 
GGGCGGATCT TGCTGTGGAT CCGGTGTTGC CGCGGCTGGC TTTGTGAAGT CTTGCCTTGC 
GGGTGACGCC AAGCCCCCCG GCGCCCCCTC GGACCCCCTG GACGCGCAGC AGACGTTCGT 
GAACTCTATG CTCCTTCCCC ATGGAGCCCG TCTGAACTCC GCAGAAGAGC CCATGGTCGA 
GCTTCCGTAC GCTTTGTTTG ACGCCCAGGA CGAGTTCATG CGCAAGATCA TCGAGAAAGG 
ATCCGGTAAC GTGGCAGGAA ACGGTCGCAT TGCTCTGTTG GGAGGAATCC AGATCAACAC 
CCCCGCCGAC CAGCCCGACT ACTTTTTACC ACTGCGCTTT GACGTCCTGT CGAACAAGGG 
CGAGACTATT GAGAAGATTA TTGATTCTCC CTCGCGCGTT ACCGCTACAA AGATCTCCAG 
TGTGTTCCCC AACGCGGTAC CGAACGAAAA GCTCCTCGCC AAGATCAACA GCACACTGGG 
CTGCTATGGG TACGGCAAGA ACTCTCTGGT TGCTACCTCG CTGTGCTGTG ACGAAGTCAA 
CCGTCCTTTG GAAGATGACC TCAAGGCCGC ATTCGGCGAA AACTTCAACA TGGGCGGACT 
CGCCGGCTTT GCGTTTGGAG GTGTCACCAG TTTCGGTGCC ATGGCAGCGC ATATTCCGGA 
CAGTGGCTCG TGTTTGGTGG TATACGGGCC GCACGTAGGT GTCGACTCGA ACGGCAAGGT 
GGGAACGGTC GAACGACGTG GACGGGCGAA GGGCGGGTCT TGCTGTGGAT CTGGTGTCGC 
CGCGTCAATG TACGTCAGAT CGGTGCGTAA TGGCGGGGAA GAAGCTGCTC CGCCTACGGA 
TCCACTCGAC GCGCAACAAA GCTATGTTGG CACTATGCTA CTCCCGTATG GTGAACGCTT 
GGAAAATGCG GAAGACCCTA TGGTGGAACT TCCATATGCT CTTTTTGACG CACAGGACGA 
GCTAATGCAG AAGATTGTTG CCAAAGGCTG CTCGAACGTT GCTGGCAACG GCAAGATTGC 
TCTTTTGGGA GGAATTCAAA TCAATACGCC TAAAGGCATG GCAGATTACT TTTTGCCCCT 
TCGTTTCGAT ATTCGCGACA ACCGCGACGT TACCATTGAA GATTTCCTGG TAGAGACTGG 
TACCTAGACC TCACATTTTC CTGGCTATGA CGCAGGCCAA TCGCTATGCA TGGAGATGCC 
ATTCTCCTCC ATCTTACCGG CATCGCGCTC TCCTTTGACG AAATGTTTTT TACCTCTTCA 
CGAGACCTTA CGAGGGTAAC CGTACTCTAT ACGCATTGTG GCAATATAAC TTTAACTAAG 
ACGCTTGCTG TTAGTGC 

 

Protein sequence

MQQRLQAVLF FWASKRDSLN LSKDLGADME EAMETGDIFL GTVVAVLTIV GISVTINLLK 
FLWRSFAAQP TTAKIRQVFP GAQTNDQLVE TIRSSLEKFG FGENSLIATS LCCDEVNRPL 
DKALSETYGS YFSMGGLAGF PFGGLTSFGA MAAHIPDGGS CVVVYGPHVG VDSKGNVGTV 
ERRGRQKGGS CCGSGVAAAG FVKSCLAGDA KPPGAPSDPL DAQQTFVNSM LLPHGARLNS 
AEEPMVELPY ALFDAQDEFM RKIIEKGSGN VAGNGRIALL GGIQINTPAD QPDYFLPLRF 
DVLSNKGETI EKIIDSPSRV TATKISSVFP NAVPNEKLLA KINSTLGCYG YGKNSLVATS 
LCCDEVNRPL EDDLKAAFGE NFNMGGLAGF AFGGVTSFGA MAAHIPDSGS CLVVYGPHVG 
VDSNGKVGTV ERRGRAKGGS CCGSGVAASM YVRSVRNGGE EAAPPTDPLD AQQSYVGTML 
LPYGERLENA EDPMVELPYA LFDAQDELMQ KIVAKGCSNV AGNGKIALLG GIQINTPKGM 
ADYFLPLRFD IRDNRDVTIE DFLVETGT