Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43229 |
Symbol | |
ID | 7196588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2388873 |
End bp | 2389731 |
Gene Length | 859 bp |
Protein Length | 279 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177504 |
Protein GI | 219111505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTTGAGGCA CCGTTGAAGA TGAATCGTCG AGAGGCTATT TTCCAAGCGA ATCAACATGC TGTGTATCAG CTTCGTCGCG GCAACAATCG AGACGCTGCG TCTATCCTAT CAGGTAGCTT GACGCTTCTA AAGGATAGTC TCTCTTCCTG CGAAGAAGCA TCTACCAGGA AGCGATCTGA TGTCGATTTG TCCTGGAGTG GAACTCTCCC ACTTGCTTCG ACTGGGATCT TTTGCTCTAC CACCGTGATT CATTGCTCTG CAAAAGGGAC ATTCGGCGGG GAAGCCAGAG AACACGTGGG AGTCCATGAT CGAAGCATTG TGTCATCGAC GTCGCCTTCA CTGGCCGAAG ATTTCCCATC AAGCACTATT TGTACTATGC TTGAAACCGA GGTTGGTATT GATTTTACTT GGCCCTTTTT CTCCAAGGCC TTTGCAATTA CGCCAACTGA TACTTGCATG GCTTCTGAAC TGACATCGAA CAAGGAAGTC ACCGAAATAT CCTTGGTGAT TTTGTTTAAT CTGGCACTGT CCTTTCACGT CATGGGTATG GAAACAGGAA AAAGTAAATG TTTGTTACAA GCTCTGTCCT TTTACGAAAA GGCGTTTCAA GTTCTCTCGG CACATGCAAT CCACCGGGGC GATTCAACGA TTGCCCTATA TCTAGCACTG TGCATGAACG CTGCGCATAT TCATCAAGAA TTTTTTAATC TGCCGCAAGC TGCGGATCTG TACAAGATGT TTAAGTCGGC CTTAGACTGG GTTGGCCCGT ATCAAATGAC CGATGAAGAG TACAACTTTT TCACGCTAAA CAGCTGCTTT ATAGATCAAC TGTGGGATGC CCATGCCCCT GCGGCATGA
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Protein sequence | MNRREAIFQA NQHAVYQLRR GNNRDAASIL SGSLTLLKDS LSSCEEASTR KRSDVDLSWS GTLPLASTGI FCSTTVIHCS AKGTFGGEAR EHVGVHDRSI VSSTSPSLAE DFPSSTICTM LETEVGIDFT WPFFSKAFAI TPTDTCMASE LTSNKEVTEI SLVILFNLAL SFHVMGMETG KSKCLLQALS FYEKAFQVLS AHAIHRGDST IALYLALCMN AAHIHQEFFN LPQAADLYKM FKSALDWVGP YQMTDEEYNF FTLNSCFIDQ LWDAHAPAA
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