| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43204 |
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| Symbol | DXR |
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| ID | 7196940 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2304836 |
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| End bp | 2306581 |
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| Gene Length | 1746 bp |
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| Protein Length | 483 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | 1-deoxy-d-xylulose-5-phosphate reductoisomerase |
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| Protein accession | XP_002176954 |
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| Protein GI | 219110405 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTTGTCGG TATCAGCAGT ACTACAGTCA GCTTGTTCCT TTGCACTTAT CGAGTCGCAC
TTTCTCTCCT ACATCGCATT ATTTGCCTCT TTCTCATTCG TTGCAACGAT GCGGTTAACG
GAACTGTCAG TCTCTCTTAT CGTCGGTTCG GCGGCAGCCT TTGCCCCGAC AACTGGTATC
TCCGCGACGC GGACGACTTC GGCCTCGACT GTACGCTTGC AATTAGTCTC CGGTTCCCAA
GGCACCGGCG AAGGGTGGAT TGATCCTTCG GCTCCCGTCA ATTCCAAAGC TTCTTTAGAA
AAAACGCTGT CCAAGTCTTT GGAAGGCAGC AATTTCCAGA AACGGCTTTC GCTTTTGGGT
TCCACCGGAT CGATTGGGAC CCAGACACTC GAAATCGTCG ACGCTTGCCC TGACAACTTT
GTCGTTGATG CGCTTTCGGC GGGTACCAAT GTAGAGCTCA TGACACAGCA AGTGCTCAAG
TACTCTCCCA AAGTCGCGTC CATGAGTACC CCGGAAGCAG CCAAGGAATT GAAACGACGT
CTCCAAGACG AAGGGTGTAA ATCCATGCCA CTGATCCTTT CCGGGCAGGA GGGCATTGTC
GCAGCCGCGA CGGTCGACAC TGCCGATACA GTAGTCACTG GAATTGTAGG TGCGGCTGGT
TTGGAACCCA CCATCGAAGC CATCAAAATG AAAAAAGACA TTGCGTTGGC CAACAAAGAA
ACTTTAATTT CCGGCGGACC CGTCATTAAT CCACTCGTGG AAAAATACGG AATCAACATG
GTGCGTTCAA AGACGGGAGA CGTATTGATG TGCCTGATCC CATCGGAAAA TTTGCTAACT
CTGCTACTTT GTATTCCATG CGTCTAATCT TCCCATTCCA CAGCTCCCTG CCGACAGTGA
GCACAGTGCC ATTTTCCAGT GCTTGCAGGG TGTCCCCCCG GGTGGATTGC GGCGTGTCAT
TTTGACGGCA TCCGGTGGTG CCTTTCGGGA TTTTTCCAAA GACGAGCTCT TTCGTCTCTG
CGAAGACAAC CCTCGTGCCG TGCAGGCCAA GGCCACGACA CACCCCAACT GGGATATGGG
TGCGAAAATT ACCCTCGACA GTGCCACTAT GATGAACAAG GGCCTCGAAG TTATCGAGGC
CCATTACTTG TTCGGTGCCA GCTACGACGA TATTGATATC GTGATTCATC CCCAATCGAT
CGTACATTCG ATGGTCGAAA CACAGGATAC TTCCTGCATT GCCCAATTGG GTTGGGCCGA
CATGCGTCTG CCGTTGGTAT ATTCTGTGTC CTGGCCCCAC CGATTGAAAA TGCCGTATAA
ACCGTTGGAT TTGGCCGAGC TTGGCTCTTT AACGTTTAGC AAACCCGACC ACGCCAAGTA
TCCTTGTATT GGGCTGGCGT ACGCAGCCGG TCGACAGGGG GGTACCATGA CGGCGGTCCT
GAACGCGGCC AACGAAGCCG CCAACGAAAT GTTCCGCGCC GACGTCGGTC TCGGCTTTTT
GGATATACCC AAGCTGATTG AAGGTGCTAT GGAAGCACAC AAGGAAGAAT TCAAAAAGGA
TGGTGTCACG TTGGAAGATA TTCTGCACGT GGATCAATGG GCTCGCGAGC ACGTGCGTCA
AGCGAGTGAA CAGCTGGACA AGAGTAAAGT TATTGTAGTA TAGACGTTCC CGGGGACGTG
CAATCGTAAA ACTAACCCTA TAGTGTACCA GGACCACCGC CGACATCCGT CGGTGAACAA
TTCGTA
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| Protein sequence | MRLTELSVSL IVGSAAAFAP TTGISATRTT SASTVRLQLV SGSQGTGEGW IDPSAPVNSK
ASLEKTLSKS LEGSNFQKRL SLLGSTGSIG TQTLEIVDAC PDNFVVDALS AGTNVELMTQ
QVLKYSPKVA SMSTPEAAKE LKRRLQDEGC KSMPLILSGQ EGIVAAATVD TADTVVTGIV
GAAGLEPTIE AIKMKKDIAL ANKETLISGG PVINPLVEKY GINMLPADSE HSAIFQCLQG
VPPGGLRRVI LTASGGAFRD FSKDELFRLC EDNPRAVQAK ATTHPNWDMG AKITLDSATM
MNKGLEVIEA HYLFGASYDD IDIVIHPQSI VHSMVETQDT SCIAQLGWAD MRLPLVYSVS
WPHRLKMPYK PLDLAELGSL TFSKPDHAKY PCIGLAYAAG RQGGTMTAVL NAANEAANEM
FRADVGLGFL DIPKLIEGAM EAHKEEFKKD GVTLEDILHV DQWAREHVRQ ASEQLDKSKV
IVV
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