Gene PHATRDRAFT_43194 details

Gene Information

• Locus tag: PHATRDRAFT_43194
• Symbol: SLC4A_2
• ID: 7196566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2279932
• End bp: 2281914
• Gene Length: 1983 bp
• Protein Length: 660 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177487
• Protein GI: 219111471

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGT CGAGTAAACG CCATAGAAAA GACGGGGCTC TACAGCATAC GGTGCTCTGG 
ATCGGAATAT TGTCCGCGTT CTGTACCACA GGATCCGCCT TTACTTCTAG TGCACTGGGT 
AGAACCAAAC CATCATCCTT GCACTTGGTG CCGGGAAGTG CTGCAGTTCT GAATTTGGGG 
AGACGTCCGG GAAAACGGTC CAATTATCTA CGGCTGTCTT TACCTGCTGA CAGAAGGACC 
AGTGTTGGTT CCAGCAAGAA TAAGGACAAT ACAGATAGCA CAAACAATGA TGCTACACAG 
TCAATCGAAG GAACGAAAGA AGATGTAAAG GAAAAGATTC AATTTTCACC TTCTTATCTG 
GAACAGATCG ACCGAATGAG AGGGTATCGA CGAAAGCGTC AATGGAAGAG AGTACTGGAA 
GAGTATTCCA ATGGAAATTC CACGGAGACT ACCGCACAAA AACACGCCAA GAATCTTTTC 
GATACAATCG TCTCGCAGGA AATGCGGGAC GACATACGAA GGCGCAAAAA GGTATACTGG 
TCCGACTGGG AAGACGGATT TAAGAACAAG CGGAAAGTCA TTCCTGCAAT TCTGTTCTTG 
TACTTTGCCT GTCTTTCTCC GGCGGTCAGT TTCGGTACCA TTGCTTCGGA GATAACGCAA 
GGATCGATTG GCATTGTTGA GTTCTTACTG AGTTCCGGTC TGAGTGGAAT GGCTTACGCG 
ATGATGTGTG GACAACCCAT GGCATTCATC GCTCCTACGG GACTGACGCT CGCTTTTATT 
TCTGGACTCT ACCGTTTCTG TATGGTCAAG GCGTTGCCTT TCTTTCCTAT CTATGCCTGG 
GTCGGACTAT GGACAAGTTT TTTCTTCGTA TTACTTGGGC TTGGTGGTTC CAGCCAATTG 
ATTCGCTTCT GCACTCGCTT TACGGATGAA GTCTTTAATG CTTTGCTCAG TGTCAATTTT 
ATATACGAAG CTGTTGCTTC CTTGAAGCGT AATTTTGACC TGGCCGACCC CATGAACTTA 
ACCATGCCCT TTGTTTCCTT GGCCATGGCA CTTTCAACTT TTTGGTGCAC CGCCAAAGTT 
GCCGCTTTTG AAAGCAGCAA GTATCTGAAC CAAAAAATTC GGTCGATTGT CAAAGATTTC 
GGACCCGTAA CAATCTTTAT CCTCATGTCA ATTTTCAATC AGCGGGCTTG GATGAAAAAA 
TTTAAGGTTC CCACACTTAC TGTGCCGAGC AGCTTTCAGT TGTCTGGTGG TCGTAATTTT 
CTGATCAATC TGAACGCTAT TCCTCTCAAT ATCAAATTGG CGTGCGTACT ACCTGCGATT 
CTGCTGACGA GCCTTTTTTT CATGGACCAG AACATTAGTG TCCGCGTCGT TAACAACCCC 
GACAACAAGC TCAAAAAGGG AGCTGCGTAC AATCTCGATA TGGTAGCACT AGGACTGATT 
ACTAGCTGCT TATCGCTCGT CGGCCTGCCA TGGATGTGTG GGGCGACCGT TCAGTCTTTG 
AATCATGTAC GCGCATTGAC CGAGACACGG TTCAACGAGC GCACTGGTGA ACCCGAGATT 
ATCGGCGTAA CAGAAACGCG AGTAACAGGA TTTGCCGTCC ATGCACTAAT ATGTTCAACA 
CTTGCCATCT TGCCGCTACT ACGATTTGTC CCGATCCCCG TTGTCGCCGG AGTATTCCTA 
TTTCTTGGAA GGAAACTCAT GTCAGGCAAC TCGTTCTTGC AACGAATACG CGACTGTTTT 
GTGGAAAAGA GTCGACTCCC GGCCGACCAC CCAATACGCT ACATTGGAAG AAAGAAGACA 
AACATATTTA CGGTCACACA AATTGGATGC TTGGGAGGAC TCTGGTTCTT TAAACAGAAC 
AGTACAACAG CTATTTTCTT CCCAAGCGTG ATCGGACTTT TGATGCTGAT CCGGGCCTTC 
GTCCTCCCCA AGGTTTTTAC GGAAGACGAA CTTATCGATC TTGGTGATCC TTCTCCCAAC 
TGA 

 

Protein sequence

MKQSSKRHRK DGALQHTVLW IGILSAFCTT GSAFTSSALG RTKPSSLHLV PGSAAVLNLG 
RRPGKRSNYL RLSLPADRRT SVGSSKNKDN TDSTNNDATQ SIEGTKEDVK EKIQFSPSYL 
EQIDRMRGYR RKRQWKRVLE EYSNGNSTET TAQKHAKNLF DTIVSQEMRD DIRRRKKVYW 
SDWEDGFKNK RKVIPAILFL YFACLSPAVS FGTIASEITQ GSIGIVEFLL SSGLSGMAYA 
MMCGQPMAFI APTGLTLAFI SGLYRFCMVK ALPFFPIYAW VGLWTSFFFV LLGLGGSSQL 
IRFCTRFTDE VFNALLSVNF IYEAVASLKR NFDLADPMNL TMPFVSLAMA LSTFWCTAKV 
AAFESSKYLN QKIRSIVKDF GPVTIFILMS IFNQRAWMKK FKVPTLTVPS SFQLSGGRNF 
LINLNAIPLN IKLACVLPAI LLTSLFFMDQ NISVRVVNNP DNKLKKGAAY NLDMVALGLI 
TSCLSLVGLP WMCGATVQSL NHVRALTETR FNERTGEPEI IGVTETRVTG FAVHALICST 
LAILPLLRFV PIPVVAGVFL FLGRKLMSGN SFLQRIRDCF VEKSRLPADH PIRYIGRKKT 
NIFTVTQIGC LGGLWFFKQN STTAIFFPSV IGLLMLIRAF VLPKVFTEDE LIDLGDPSPN