Gene PHATRDRAFT_43176 details

Gene Information

• Locus tag: PHATRDRAFT_43176
• ID: 7196769
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2234459
• End bp: 2236609
• Gene Length: 2151 bp
• Protein Length: 464 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002176938
• Protein GI: 219110373

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTGCGTGTA GGTGAGCATC GGACCATGGT GGGATATTGT GACATTTTCG GGCAACCTGA 
AAGCGTGATT TAGTGTTTGC GTGTCGATAA TGCTTCTAAG CGTCGCGGAG CGTCTTTGGT 
CCCGTCCAAA ATGGTCTTGG ATACGTCGAG GGTTGCCTCT GGTTGCGACG TACGTTTTAC 
GTGAACGCAG TACTACGCGC CGCTAGTCTG CGCCCGAAAA ATGAACCCGT TGCTTGCTGC 
GGACCCAGCC GCTTCGATCG TCGGTATCCT TTGGTTGAAT CGTTTCGACT TCAATCCTAT 
GACTTGAATA TGTCAAGTCA TCGCACCGTT GATAAATATG CACTTGATCC CGTAGAGAGT 
CGAGGACGGA AACACATGAT TGCCTGATTC TGACTGACCA TTATTGTGAA TTCTGTTTTT 
GCCATTTTGT AGAAGTGGTA CATTGATTGA TCGACGGGGG TTCTTGACGC GTGGGTACTA 
GAACGCTCAC ATGGAGGGGG CTAGTACAAC ATCCTCGGCG ACGTCTTCTG TCGACGGACG 
AAGCGCCGGG GGCGGTACCT CCCACAACAC TACCGCATCC GCGTCGGATT ATTTGAACAT 
CGGAATGTTT GCCTCGGGAA ACACGCCCGG GGGCAGCGAC TTACTCGGAA ACAGCAACGC 
GGTCTTCTTG GGGAATGGCT TTGGAAATAT TGATTCTACC AATACAGCAG CAGTATCAGC 
ACTAGTGAAT TCGACAGGGA CAAGCTTTGA TTTGACAGAT TTTCCTAGTT TAGCGGGAGG 
AATAGGTGGG GCAAATGCGA GCGTAGCCGG GAATGGCCTA GCTGCCGCGT TACGACAGCA 
GCAACAACAA CAACAACAAC AGCTATTGGC GCACCAACAA ATGCTGCAAA GCAAGGGAGG 
TGTAAGCAAC GCTTCAAACT TATACCGACT GGCTATGTCG GGAGCCAACG GAAATTTTAA 
CATGGCAACC GAAGACTTCC CGGCACTAGG GGCCAACGCA CCACAGCCAG CACCGAGTGG 
ATCCTCAGCG CTGAATCCGT CATCGCTGTT GTCGGGAAGC ATGCCTGTAT CGAGAGGCGG 
CAATGCCAAC GGAAACGTTG GTGGCTTGTA CGCCGATATC GATACCAACA AGAACAATAC 
TGCTAGCAGT GGCTCCCAGT TAGATGTTTC AGGTGGTCTG TTAGGTGGTA CAGGTCTTGG 
TGGACTAGGA GGTATTCGAG GTCTTCAGCA AGCCGGTATG ACCGGGGCTG GAAATGCAAT 
GGGACGAGCG CCGTCATCGA CGGTACCGGG TGCGGGAGCA ATAGGTTCTT CGAGCTCCGG 
AGGGGCAGCG GCTGGTGGTG CACTGACTGG TGATTATGGT TTGCTGGGAT TACTAGGAGT 
CATCCGAATG ACCGATGATG ATAGAAATAC TCTGGCACTG GGGTCAGATC TGACAATGTT 
GGGTCTGAAC TTGGGATCGA CCGAACAGAT TTACAGTACA TTTTCTAGTC CATGGTCGGA 
CAATGTCGCA ACAAAAGAAC CGCATTATCA GGTACGTTAG TGAAGTCGCA CTTTGATTTC 
TACCGGAAAC TATGGCTGGC CCTAAACCGA CGATTTACGC ACCTTTACTA GCTTCCTGTG 
TGTTACTATA TGCAACCACC AGCACTGAAA ACAGGCCACC TGTCAAAGTT CCAACTCGAA 
ACCTTGTTTT ATATCTTTTA TGCTTTGCCA AAAGATGTTT TACAAGCGTA CGCAGCACAG 
GAACTATATT CACGGGAGTG GAGGTATCAC GGAGAGCTTA AGTTGTGGTT CAAGCGAGCA 
AGTCCTTCGG ACGGCGTGTC TAGCAGTTCA AGTGGATCAC CGCAGTACCT CTACTTCGAC 
ATTAACTCAT GGGAGCGACG CCTTTTTAAT GGCAGCATGA ACCAGAACAT TACTAGCGGC 
TTCATTACGG AAGACGAGGT ACAAGTCAAG TTCCCAAGCT CATGAGTTCA TTGTCTCAGT 
TAAGTTGGTT TCATGGCTAA ATTAGCTAAG GCGTCGTAGT CAGGCAAGCT ATGGAACTAA 
TGATATACTA GTTGCAAATG AAAAAACGCA TTCTGCTCTT TGCTGACTTA CTGCCAATAA 
ATTGTTAGTC GATAGGTATA ATTCCAAGTA ATTTAACAAC CAATAAGAGC T 

 

Protein sequence

MEGASTTSSA TSSVDGRSAG GGTSHNTTAS ASDYLNIGMF ASGNTPGGSD LLGNSNAVFL 
GNGFGNIDST NTAAVSALVN STGTSFDLTD FPSLAGGIGG ANASVAGNGL AAALRQQQQQ 
QQQQLLAHQQ MLQSKGGVSN ASNLYRLAMS GANGNFNMAT EDFPALGANA PQPAPSGSSA 
LNPSSLLSGS MPVSRGGNAN GNVGGLYADI DTNKNNTASS GSQLDVSGGL LGGTGLGGLG 
GIRGLQQAGM TGAGNAMGRA PSSTVPGAGA IGSSSSGGAA AGGALTGDYG LLGLLGVIRM 
TDDDRNTLAL GSDLTMLGLN LGSTEQIYST FSSPWSDNVA TKEPHYQLPV CYYMQPPALK 
TGHLSKFQLE TLFYIFYALP KDVLQAYAAQ ELYSREWRYH GELKLWFKRA SPSDGVSSSS 
SGSPQYLYFD INSWERRLFN GSMNQNITSG FITEDEVQVK FPSS