| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43171 |
|---|
| Symbol | |
|---|
| ID | 7196767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2224778 |
|---|
| End bp | 2226281 |
|---|
| Gene Length | 1504 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177473 |
|---|
| Protein GI | 219111443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.899265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AACATTTCAT ACATGTTTGT TTCGTAAATT GTCAGACCAT ACAGTGTTTG ATACGAGCTT
TCAGGGGATG CACTGGCTCC CTGCACATGG ACAAGTATGA CACTATACAA GAAAACCGTT
CTGTTCTGGT GGTGTACTTT TTGCATTGGT TGGCGAGGAG CTTGGTCGTT AGCGTCACCT
ATCTATCAGC TGCGAAGGCC GGGCGCTCGC CTTCCTCCGA CGCCAAAATC AAAGCTACGG
CGAGATTACA GTTCATTGAA TGATTCTTTC CTTTCCGCTA ATGCAAAAAG GCGACATGGA
CGTAAGAGGT ATGGCCCATT GCAAACCTTT GCTCGCAGTT TTTGGAAGGG TGTCACGTTG
CCCTTCCCCG CTTTACGTCG AGTCGTGTTG ATCCCCGGTA CCCAACGCAA AAAAGGAACT
CGAGGAAACA TTTCCGTGGG ATTAACACTG CGGGAAGGGT TCTTGGCCGT CACAGCCTAC
CTGGCTGTTG GAGTGCTAGC ATATTCGGTG GTACTGGAAA AATGGTCGCT CGTGGATGCT
ATGTACTTTA CCTGTGTGTG TTTCAGCACC GTCGGATACG GTGATTTGTG CCCCACTAAT
ACGGCCTCCA AAGCCTTTAC ATGTATTTTT GGATTGGGTG GGATAGCATT CCTGGGAACC
GCTGTGGCAA CGATTGGGTC TAGTCTTCTC CAGGCCGAAG TGGACGCCAT TGCCAAAGCA
CGCGAAAAAA GCAAGGTGCG TCTCATGAAG GTCTTCGAAA ACATGCCCAA AAAGCTGAAC
CACTTTCGAA CACAATCGCG AGAAACGCAA AAGCGTGTAC TTAAGGACGC TGGCAAAAGC
AGAAAAAAAA GAAGGCGCTT CTATGAAGGG TTAATTTTTG GATCTGTCGA AGAATTAGAA
GGTAGAAACA GGATGCAATC AATTCTAAAC ATGGTGATCC GAGTGGTTCC CTCTCTTTCT
ATCATCTTCG GAGGAGGTGC CGCCATGAAG GTTCTGAATA AAGGTTGGTC ATGGACAGAG
TCTATTTACT ATTCGTTGGT CACGGGTAAG TTTGCTCGGT CCATATCTCG CCATCTCCTT
CTTCCGTATC TCACTTTCCT TGGTAGCGTC AACGATCGGA TTCGGAGACT TGTCACCACA
AACCCGCCAC GCCCGAATGT TTGCTATTCT GTACATTCCC TTAGCTGTAG CAGCGGCTGG
TGATTTACTT TCAGGGATTG CGTTATCGTT GGTGCAACGT CGGCAACGCG AAGTTTACGA
GCAACAGTTG GAACGAGATT TGACGATTGA ACACCTGCAT CTAATGGACG CCGATGGTGA
CGGAAAGATA ACACGCGAAG AGTACGTCCA ATTTATGTTG ATTGAAATGG GCCGCGTTGA
TCAGAAAGAG CTAGACGAGC TGTATCATCA ATTTGAGCGA TTGGACGTCA CCCGATCCGG
ATACCTTGAC AATGACGATC TTAAGCTAAT GGCGAAACTT CGTGGAGCGA AGGTAAAGGG
GTAA
|
|---|
| Protein sequence | MTLYKKTVLF WWCTFCIGWR GAWSLASPIY QLRRPGARLP PTPKSKLRRD YSSLNDSFLS
ANAKRRHGRK RYGPLQTFAR SFWKGVTLPF PALRRVVLIP GTQRKKGTRG NISVGLTLRE
GFLAVTAYLA VGVLAYSVVL EKWSLVDAMY FTCVCFSTVG YGDLCPTNTA SKAFTCIFGL
GGIAFLGTAV ATIGSSLLQA EVDAIAKARE KSKVRLMKVF ENMPKKLNHF RTQSRETQKR
VLKDAGKSRK KRRRFYEGLI FGSVEELEGR NRMQSILNMV IRVVPSLSII FGGGAAMKVL
NKGWSWTESI YYSLVTASTI GFGDLSPQTR HARMFAILYI PLAVAAAGDL LSGIALSLVQ
RRQREVYEQQ LERDLTIEHL HLMDADGDGK ITREEYVQFM LIEMGRVDQK ELDELYHQFE
RLDVTRSGYL DNDDLKLMAK LRGAKVKG
|
|---|
| |