| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43164 |
|---|
| Symbol | |
|---|
| ID | 7196764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2211807 |
|---|
| End bp | 2212842 |
|---|
| Gene Length | 1036 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177468 |
|---|
| Protein GI | 219111433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGCTTGTTT CTGCCGCTAC AGGAGCCGGT ATTGAATAGA AACAACGCGA ATCGTCGGAA
TGACAATGCA TCTTCTATCG CTGGTTTTCG TGTGCGCACT GGTATTGCCC AGCGTCGCGT
TCTCAACACG AGGAAAAGCG GTGAGACTCA TGATTCGTGA TCCGACCAGT AGTCGTATCG
AGGCACACCG TAGCGTGGGA GACGTAGACG TTCCCACGGT GCAACCAATC ATCACAGACC
GACGCCGTCT ACTGATAGAA GCGAGCGGGA TTGCACTGTC GGGATGGATC TTGGGACAGC
CGTTGCCGGT TCGGGCCGTG GAGCCGCTCG CGTCGCCCAG GACAATTGTT GTCACGGGCG
CCAATTCGGG AATCGGTCTG GAAGCCTGTA AACGTCTCGC CGATCAAGGA CTCCGGATTG
TACTGGCGTG CCGAACGCTT CAAAAAGCTC GGGATACGGC AGAGTTGCTC CGAGACAAAC
CTGGACAGTT GATCCCGGCC GAATGCGACT TAGCCGATAC CAGGTCGATG CAAGCCTTTG
CCACAGATCT ACCCAAGTTG ATCGGCAGCC AGTCCAAGCT AGATACGGTC TGTCTCAACG
CTGGGCTTGC TCGAAATACA GCCGCTAAAG ACGTAGCAAG GACAGCGGAT GGGTTTGAAC
TCACAGGTGA GTCAAACGTG GACTTGGCTG CGTCCTCTGA GATTGCCGAT CGACACTTCA
CTAACCTTCT GTAAATGCTT TTCTAGTTGG TACCAATCAT TTCGGTCATT TTTATCTCAA
CCATCTACTC TTGCCCATGC TCCAAACCGA TGCGCGTATT GTCGTTACCG CCAGCGGCGT
ACACGATCCA GAAAGCCCTG GTGGAGCTCA GGGTACGCCC GCCACTCTTG GAGCCTTGCA
GGGTCTCGAA ACGGATGGAC GAGCCTGCAC CATGATTGAT GGTGGTTCGT TCAACCCTGA
CAAGGCCTAC AAAGATAGCA AGGTATGGAT GGATTGTGGA AGTGCCCTCT GGTCTACAGA
CGCGTATCTG CTCTGA
|
|---|
| Protein sequence | MTMHLLSLVF VCALVLPSVA FSTRGKAVRL MIRDPTSSRI EAHRSVGDVD VPTVQPIITD
RRRLLIEASG IALSGWILGQ PLPVRAVEPL ASPRTIVVTG ANSGIGLEAC KRLADQGLRI
VLACRTLQKA RDTAELLRDK PGQLIPAECD LADTRSMQAF ATDLPKLIGS QSKLDTVCLN
AGLARNTAAK DVARTADGFE LTVGTNHFGH FYLNHLLLPM LQTDARIVVT ASGVHDPESP
GGAQGTPATL GALQGLETDG RACTMIDGGS FNPDKAYKDS KVWMDCGSAL WSTDAYLL
|
|---|
| |