| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43161 |
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| Symbol | |
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| ID | 7196915 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 2203104 |
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| End bp | 2208142 |
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| Gene Length | 5039 bp |
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| Protein Length | 1601 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176931 |
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| Protein GI | 219110359 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.496244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGAAACAAAA AGGCTCCTCG TTGGGACGAA GCCATGCGAG GGATATAGCC TCCGTTCGAA
CTAGCGATAC TCTCTCTCTC TTTGCACAAA ACTGTAAACG CTGAGAGATA AACTGATCTT
GTTATTCGCT GTACCTTTTC TGTATCGATT AGTACCCCCA CGGTTTGGAC AAACTTTCAA
CAATGGCGAA TACCGAAGGT CTTTCGGACG AAAACGTCGA GTCGCTGCTC CGCTTCGACT
CCTCTGATCA CACGCGGGAC CGTCCCAGGA ACAACCCATC CGCACGGTTA CGCGAGCGGA
TGGATGCTCC CATGGGCGAA CGACCCGCGG CGACAGTGAT CCGTCGATCG ACGGACAGTG
GTCGACGACC TCGAGGCCGT GCCATCGTGG AACCCACGGC ACCGACCCGT CTCTCGACCA
GTGCACACGG GTTACCTCAT GCCGACAACG GCAATGCTCC CTCGCCGCGT GCCGCAGCAG
CGTCATCCCA GTATTTACCG CAAAATCGTC ATCAAGAACA ACGTCAGCCA GAACTAGAAC
AAGCAGAATT GAATTTCCCG GTCGTGGGAT CGATTGTGGA ACGACCACGG AATCGCACGC
CAGGCGCTTC TTCGTCCGAG CGCACACGTC CATCCAAATT TGCTCAGGAA AGGCACGTAC
GCGCCGGCGA TGCAACGTCC TTGAATCAGG GCTTTCCGTC ACTGAACGTA CCGCTCGGAA
CCTTTGTCAA GGACAACCAC CAACAACGAC GGAACGCAAC GAAAACAACG ACCAGTATTC
CTCCCACATC CCCTCTACTA GTAGAGTCAG CAGAGGTGCC AGCGAGAACG TCCAATTCGA
TTGACGAGCT ACGAACTATT AGTCAGCGAG ACGCCCAAGG TATGCTACAG AACATGACAC
CTGTGGAGAT CCAATCGCAC GTACAGGACC TACGACAGGC GTTGCCGTCG TCTACACTCG
CCTTCTTGCA ATCGCGATCC AAAAAGTCAC CGGTTGCAAA ACCTCCGACC GTACTTGCCG
AAGCAAAGGT CGAACATTCG GAACCAGCAC GTGTAACACG TGACGATCGC GTGCTAGGCA
AGGAAGAATT CTCACAGTTG CTCTCATCCA TCAGTACCTA CGAGGATCTA GATGCCGCCT
ATGCGACGTA CGTACCCACT GAGCTACAGG AGAAGGCGGC CAGTACGCTC GATCAACAGC
AGGACGATTC TTTTCCCATG GCGTGTGATC TGTTGCGCTC TACCGCTCCT CGACAAAATT
TATGGGCCGC GCGGGCTGTG TATCATCGAT TACGTGACGA CTGGGAGGCT GGTCAGTTTT
GCTCGCTCGA GACGGATCGA GATGTCGTTT GGCCATATCC GGTAGTGCTG CCAGTTTCGT
TGCGGTGCTT GCTGGATAAT TCGTTCCAAC GAACCAATGG GTTTGTGCTA CATACCTACG
TATTGCAATC AATTTACATG TTGCTCTTGT TGCGGTCGAG CCGTGAGCAT GTTTTGGACG
TAACTGGCCA GTACGTGTCA TCCAGTATGG TGTATCAAGA ATGCGCTTTA GACGATGCCG
TGCCGACGCC CCCGACTTCT GCATATTATC GCTCAAACCA AGTTACCCCT CTTTCCGTCG
GTGCGCACGA AAATGTAGCG TACTCCACTT CGTCGAGCTC GGAGTCGGCT ACAATGGACG
GACAAGCGTT TCAATCGGAT CCAATGTGGA CCTTGCTATC CAAAATGAGA ATCGTACCGC
GCCTGGCAAG TTTGCTTTAT TGTCCAGATG TTCCACTTAT ACTGCTTCCT GCGAAAGCTT
TAGTTTCGAT ATGCGGGATT TTGGCTATGA TAGGACAGCG GTCGCCGGGA GCGGCGTCGG
CTATTGTTCA GCACCCGACG CTCTTGTCTA ATTTAGTGGA ACGAACCTGC GTACCATTCG
ACGGAGAAAG TCGCTGTAAC CCGAATGTCG CTCTTCCAAC TATTTTGTTA CTTTGCACGT
TGGCTCGGCA ATCGCGAGTG GCAGCTTTGG GCATTTCAGT GGATGCGGTG CTGCTGCAAA
TTTTGTCACG CAAGGCTGAA CACGAGTCCG AGTATCGGCT ACAACGGTGG ACAGTTATTT
TATGGCGTAC CTTGCTTCGA TACGGTCACT GCTTATCCCC TCTATCCGCT CTAGTGCCGT
TAGCTGCTCC GCATCTATCA CTAGGAGTGT CTTATCGTTT TTCTTTGGCC TCCGATTTTG
CATCTGCATT TGCGACGGTT CAACGCTGTG CATGGGTAGC TTCGCTGATG GACGAAAATG
ATAAACGCAT TACTGCAGAG CAGCAAACAA TTTTGGCGCA CTCTGGTGCT TGGTTAGCTT
CTTCGATTCG AAACGCAATT GTCAATGTTT CCACTCAAGT TGCCGTTTCT TCGATCGATG
AAAGTACCTC GGATTGGATT GCCCGTCTTC GATATGGTTC CAGCTGCTTT CAATTGCTCG
CTTCTTTTCT GGCCATTGCT CAAGACAATT CTACAAATAC TGAAGAATGT AAATCAGACA
ACTTGACTGT TTTGGAAGAA AGAGACTGTG TGTCTGCGTT GGTATCTATC GAAAATTCGT
GTGTCATGCA ACGAATCCTT GATGTTTCGA TGCGTTCCGC CTTTGTTGTC GAATTTTCTG
GAAATGCTCC ATTCAACGAA GAAGAGGAAG CCTGCGCTTG CACCTTTCTC GTTGAGTATT
TGAAGCTACT GGAATCTTTG AGAGAACGGT TCGATGTCGA CATTGATTCA ACCGAAACTG
GGCGCAATCT CCGCTTACTT CTGGAAAGGA TTACTCGTCT TTTGGAAGAC AAATTTCTCT
TCGCACGGCT GCGTGGCGAA GTCTCAGAGG ACGGTGCTGA GTCAAAGAAG TATAACCGCC
AGCGGCGGGC CTGGTTAAAC CGGTGCCACA GTGGCATTGT GAAATTTCTT GTCACACAGC
ACAGCACTCT TTCTGAGCTC TCTGGGCTGG CATGCACAAT TATCGGTCGT CTCGAGAACG
GTGACGAAGC TCTGGCTGCG AACCTACTGA GTCATGACTG TCTATTCTCG TCGCAGAAAC
AACAATTCCC AAGAGCGGTC TCGCCTATTT CAACAATGAT GGTTCGAGAA CTATGTCGTA
CGCAGATAGG CAAGACTCAA CTAGATCACA GTTTCAAGCT TCAACATGGT TTAGGAATCA
CGGCAGGAGG CGTGGGACAA TTTGACATAT CGTCTCTGTT GAGTCAAGCG GACGCTGGTC
CTGCCCCGGA TCAAACTTCG CCTGATGCGT TCTTGCCTGT TGGTAAACTT TGGGTCTGGC
AAATTCTTTC TGGTGCGTCG GCTCTCGGTG TTGGTCAAAT TAGACTCCAG GCGGGACATG
AGGAAGTGAT TTGTATTCTT ATGTCATGCT TGGACCTTAT TCAAGGTTTT GAAAAGTACC
AATACATCGG TGGCGAGGGA TATGGAAACA GTCTTCCACG GGGTGAAAAG CTATATCACT
TGATGAATAT TTGCCTTCAG ACAGAAATTG TCCTTTCCGA AGGTATTATT TTAGCGGCTG
CCACAAATTT GTTTGTTGAA TATACCCAGA GGAACTGCAA TCAGAGCTTC GTTGCCAACT
TTTGCGACGC ATGCTTGCTT CATTCGACTG CAAGAAGTCG CCGGGAAGTC AACGAAAAAA
AGACAGAAGA AGAGACGAAT CTTCTGGCAT TACTTGATGA GCCGTCGGAC ACTTTACTCT
TGACGAAGGC GTCGATGAGG AGTTTGTCGG ACTTTGTCAT TGATTTATAC GAGTCCTTCG
TCGATCATGG TGCACAGTAT CCCTTCTTCA CGAAATGTAT TCGCACTTTT CTCCTCCCTA
CTTTTCCAGC AAGAATACGA TGCGAATTGC TAGGTCGCTT GCGGGGTCTA CTACACTTGC
TTTCTCTCGA AGGGGACAAC ATGTCGGAGC TATTATACTT TTACCTATCG GCGAAATCTC
CACTTGTTGA TGAGTCCTCT CGCGACGATC CAGAATTTCT GGATGAGATT ACTAGTGCAT
ATGCGATAGG AAGTGGGACT CGCGGAGACG AGGGGTTCGT CTCCATGTTT GCAGTGGCAG
CTTTGACAAA GAGTTTGGCA ATATCGCTGG CCTTTCCAAG TAGCGGACAA TCAGCCTCGA
AGCGGCGAAT TCAACGCCTT GAGCATTCTG TGGCGATCAA AGTTCTTCAA AGCGCTGCTC
GCTTTGCGTC GTCACGAAGG ACTTGCTCCG CTCTCGTATC TGCTGTCATG CAAGGAGATG
CAAATGACGA TACATGTAAT CTGAATTCGG AACTGGTTTC AGCACCAATT GACGATGAAA
AATGGAACGC AATTATAAGC GTTCTTCGGA ATCGATTCGC TGACTCTGTA AAAATTATGT
TGAATGAAGG AACCGAAATT CGTGCCGACA TGGATCTGCT TCGCAACTTC AGTGGCTACT
TTAACGCTCT GTTGGACGGT TGTTTTGCGG AATCTCGATC GCGGTGTGTG GAGTTGTTAA
GCTTGGACAA GGCAGCTGTG CAAACTCTGA TCGATTTTGC CTACGATACA AACAGCGTCG
ATTGGGACGC GGTAGAGGAT CTCTCTTTGC TTGATGAGGC AGCTGACTAT CTTCAAATTC
ACAACGAACA GCTGGATGTT ACACTGCAGG CTTTGCATAT TGTGCAAGAT TGTGTGGAAC
AAGGGTGGGT GTCCTTTACC AAGCCACGGC ATGTATTGCA ACTACCCATC AGTAAAAAGA
ATCGTGCCTG GCGGCTCTGG GTGTGCTACG TGCTTTGTCT CGAGCTGCTG CCGCACCCCG
AGACACACGT CGACCAGCCA ACATTTACTC AAATGCTTCA GAAGATAACC GGCGATGCCG
TTGCCCTTCG TCGAGAATTG ATCGAATACG GGCTGGTGCT GAGAGAAGGA GACGGATCTT
CGTATTGGCG TCCCCATTAT AGCGTAAGTA GGCTCCAAGA GTGGATAGCC GGCATTCCAC
GTCGGGTCAT ATAGATTTGC ATGCAAGCCA ATACGAGCGA CGAAATTCGC AGCTTGTAG
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| Protein sequence | MANTEGLSDE NVESLLRFDS SDHTRDRPRN NPSARLRERM DAPMGERPAA TVIRRSTDSG
RRPRGRAIVE PTAPTRLSTS AHGLPHADNG NAPSPRAAAA SSQYLPQNRH QEQRQPELEQ
AELNFPVVGS IVERPRNRTP GASSSERTRP SKFAQERHVR AGDATSLNQG FPSLNVPLGT
FVKDNHQQRR NATKTTTSIP PTSPLLVESA EVPARTSNSI DELRTISQRD AQGMLQNMTP
VEIQSHVQDL RQALPSSTLA FLQSRSKKSP VAKPPTVLAE AKVEHSEPAR VTRDDRVLGK
EEFSQLLSSI STYEDLDAAY ATYVPTELQE KAASTLDQQQ DDSFPMACDL LRSTAPRQNL
WAARAVYHRL RDDWEAGQFC SLETDRDVVW PYPVVLPVSL RCLLDNSFQR TNGFVLHTYV
LQSIYMLLLL RSSREHVLDV TGQYVSSSMV YQECALDDAV PTPPTSAYYR SNQVTPLSVG
AHENVAYSTS SSSESATMDG QAFQSDPMWT LLSKMRIVPR LASLLYCPDV PLILLPAKAL
VSICGILAMI GQRSPGAASA IVQHPTLLSN LVERTCVPFD GESRCNPNVA LPTILLLCTL
ARQSRVAALG ISVDAVLLQI LSRKAEHESE YRLQRWTVIL WRTLLRYGHC LSPLSALVPL
AAPHLSLGVS YRFSLASDFA SAFATVQRCA WVASLMDEND KRITAEQQTI LAHSGAWLAS
SIRNAIVNVS TQVAVSSIDE STSDWIARLR YGSSCFQLLA SFLAIAQDNS TNTEECKSDN
LTVLEERDCV SALVSIENSC VMQRILDVSM RSAFVVEFSG NAPFNEEEEA CACTFLVEYL
KLLESLRERF DVDIDSTETG RNLRLLLERI TRLLEDKFLF ARLRGEVSED GAESKKYNRQ
RRAWLNRCHS GIVKFLVTQH STLSELSGLA CTIIGRLENG DEALAANLLS HDCLFSSQKQ
QFPRAVSPIS TMMVRELCRT QIGKTQLDHS FKLQHGLGIT AGGVGQFDIS SLLSQADAGP
APDQTSPDAF LPVGKLWVWQ ILSGASALGV GQIRLQAGHE EVICILMSCL DLIQGFEKYQ
YIGGEGYGNS LPRGEKLYHL MNICLQTEIV LSEGIILAAA TNLFVEYTQR NCNQSFVANF
CDACLLHSTA RSRREVNEKK TEEETNLLAL LDEPSDTLLL TKASMRSLSD FVIDLYESFV
DHGAQYPFFT KCIRTFLLPT FPARIRCELL GRLRGLLHLL SLEGDNMSEL LYFYLSAKSP
LVDESSRDDP EFLDEITSAY AIGSGTRGDE GFVSMFAVAA LTKSLAISLA FPSSGQSASK
RRIQRLEHSV AIKVLQSAAR FASSRRTCSA LVSAVMQGDA NDDTCNLNSE LVSAPIDDEK
WNAIISVLRN RFADSVKIML NEGTEIRADM DLLRNFSGYF NALLDGCFAE SRSRCVELLS
LDKAAVQTLI DFAYDTNSVD WDAVEDLSLL DEAADYLQIH NEQLDVTLQA LHIVQDCVEQ
GWVSFTKPRH VLQLPISKKN RAWRLWVCYV LCLELLPHPE THVDQPTFTQ MLQKITGDAV
ALRRELIEYG LVLREGDGSS YWRPHYSICM QANTSDEIRS L
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