Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43159 |
Symbol | |
ID | 7196914 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 2193158 |
End bp | 2201014 |
Gene Length | 7857 bp |
Protein Length | 2413 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176930 |
Protein GI | 219110357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.280738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCAT GCCAGACGCT CTGGGCTTTC CCTTTGCAGT TAGGCTAGTG TACTATCTAC TATTTAGGCC CACATTGGCG AAAGCGTGGG TGTGGGTGTG GGGGTCTGGA CCGCAACCGC AACCTCCTGG AGAGAATCTC TGTGGGTTCC CGTTGCGCCG TGCCCACGTC CTTGCGTGTT GGACGTTGTT TCCCGGTATG GTAGCTCGAA GCATTGCGAC TTTCCACTAT TACTACCAAC CACCAACTAC TTCTGCTACT CGTACGAGCA TTAGCATTAG CACTAGTACG ACCTCCTTCT CAAGGAGTTG GGGATAACGA ATCGCTTCCA GTTCGTTAGC AAAAGCAGAG ATCAGGCCGT CTCCCACCCC GCTTGTTCGT GTTGACTGTA AAGAAAGACG TTGCGCACCG GACGACCGCT ACGGATACGT TTCGTTACGT TACGTTAATT TTCTACCACC GCCACCACCA CCACTACGAA CGATACGATA CGATACAATT TCATACAATA CAATCCACTA CGATCGTGAC AATCCCTCCC GTAAGTCGTG TCATGGAGTC GACGGCAGCC AACGAGACGT CCGTGAAAGT CGTCGTACAG GACCAACACG AAGAAGTGCT CGAACCACTC GAGTCATTGG AAGTGGACCT TGACAACGAT GAGTATGCCG ACATTATCGA CGGCGATGAT TCGGTCCAGC CAGAATCCTT CCCGCCTCCG ACACCAACAA CACGCCAGGC ACTGAATGAT TTCGAACCCA CCAACAGAGA GTCGGACGAT GACAACAACC ACAACAACAA TACCGAAAGC CATACTCGTA CCGATCACCA CAATGCAAAG GCGGGTGCTT CAGAGACGGA ACCGGCCGGA GAAGATGATC GGCAGCTCTC GGCATACGAA CGCTTACGAC TGGAACGTAT TCGCCGCAAT CAACAAAAAT TGGCCCAACT CGGACTCGAA GGAAGAACCA GCGCCGCCGG AGGCTGGGGT CCACGTTCGC GTCCCAAAAA GCCCAAACTC TTGCGGAAAA AGGCCGACGA ACCCGCACAG CAACGATCCA GTCTATCGCG ACGCACCAAA ACTGAACCCA AAAATTACGC CGAACCGCCA AACTCCGTAT CGGCCTTGTT GCGCAAACAA GGCGAAGAAG CGGCCGCTGC GAAAAAGGAT CAACCCTTGG AGAAGAAAAA AACCAAGGAT CTGAGTGAAC GGATGGAAAG ATTTGTGCAC TTGGAGTTCA AGCGCATCCG TGGTCACAAA ACACTCGTAC ACAAACAGGC GAAACGAGAC CTCCGCCAGG CCGAACGGGA ACTGAAGTAC TGGAAGTCCA TCGCGAATAA GCAAAAACGC CGAGAAATGC GCAAAGCGGA AAATAGACAA AGTCTCAAAA CGAAACAGGA AGAAGAACGA CGGCTCTTGG GTGGAACGAT CAAGGAAGTT TTACAACAAA TCGACGCGCG GATGCCCGAA CTCGTCCAGG CGGCTGCGGA ATACGACGAC AAATATGAGG TACATACGTA GATTGGCAAC CCCAACCACA ATTGTCTAGT AGGAGATGGA ACAGACTAAA TCACTCACCA ACGATCATTA TCTTGGTGGC CTTGCTTGTT TGCTTACCAA CATTAGGCGG AAGACCGGCG TCAAGCACGT GAGCTTAAGC GCTTGGAGAA CGAACACCGA ACGAACTTGC TGGATTCTCT GGATCGCTTT CCAAAGGCCA TTAAGGTACG TGTAGCACAA ACCGAACGGG ACCCGCAAAT TGGTTGCCGA TCAAGTCTTT AACGCTGTGT TTTTTTTTTT TGCGCAGTCC GCAGTATCGC TCTTGAACAC GACATTACTG GACCGGGCTC CACGAGAGCC AGCACCGACC CGTCGAAGTC GTAGATCCAC TGCCGAGGAA ATCGTCACAC CCCTAAAGTT AGCACAGAAT CAATTTACTG CCAATTCTCC GGAAGAAGAG GATACGTACC GAAACGTTGC CGACAAAGAA GCAATAGCCC CGGAGGACGA TGAAACCTCT AACGGAAGAG ATCGGCCTGG TACGAAACGG AAACGAAATG CTCGGAATGT TGGTGGCTGG GTTTCTCCTC AATTTGCGTT CGAGATTGAT AGATCATGGC TTGACCAGGA CAACACAAAA GCGCACTTTG ATTTGTATTC ATACGTACCA CAAACTGGGG ATACTGTGTT GTAAGTTTAA AAAGTATTAA ATCGGGGCTT ATGTTATTCA ATGGCTGGTC CAATTGGTTT GCTCACACCA TCAACGTTTT CTTCGACCAG ATACTATCCA GCCGGGCATC GCGCATATGT TAAAGACTAT CCCGATATCC TGGGAAAAAA GACGAGGCAG ATTACTAGAC TTCCTCTTTG GGAACGCGCG GTCATTGAGC GGGACAAAAT AGACAGAGGC GAGGGGCCCA AAACCGGTGA CAGTTCCTTG AATGTTTGGT GGACGGATGA GTGGTTGGAG GGCATCGAAG GTGACCTGGG AAAATATCCA ATACTATGTC GAGTTCACGC CACAAATGCT GAATTTCCGC CGGATCGATT CACTAAAGTA ATAAAAAAAG GGGAGATTTC TTGGAAAGAT CCTAAAGAGC AAACCAAAAG AACGAAAGAA TCATCAAGAA CACCTCTACG ACTGGCCGTC ACACTACGGC CGTTGGCACC GGTTGTTCCT CCTCCTAAGG AATCCAGCGG CGATGCCTTG GCCAGCAGTA CTCAACCAGA TCTGCTCCCA TCACGTTTCA AGGATGACCA ACCGTTGGCT CTTCCTCCAT TCTTCACAGT TGTGACGTTC CCTTCGCAGC AGAAGCCGTT TATAGTCCCT TTTGCATGGG CTTACTCGAT TTCCAATTCG CTTTGCCTGG ATCAAAGCGT AGTAGAAAAA GGAAGGGAGG CTTCAAAGTT GCACGTCCGT TCCTTTGATA CCCTATCCGA CACTTCATAT TCTCGATTGG ATGACAGAAT TGAGGCTCTG CAAGTATTCT TAAAAAAATG CACCAGAGGA CCACGCGGAA AATTGAGTTT GCCGACCGAT TGTTTAGAAT CAGCAGGGAT GCTGTCGCTA GCAGAAACAA ATGTGTTGCT TGATTTCTTC GACCATTTTG TAAAAGACAG ACAGTCTGAT GTTTCTGATA CCCAAGCCGT GGTAGGTTTT TTTAACTTGG TCAGGTCCAC ATTGCCTTTA TGGAACGGCG TCTCTGTTGT CCACAGCCCG GACGAGAAGA AAGACAGGAA GATCTCACCG TGGGACCTCT CCCTATGGAA GAAACGAATG ATGATTCCAG ATTATTCGCC AGATAATTTG TCAGATGCGT CGTTGTCGAT GGACGATCGA CTGCGGGATC GGATAGAACG CGTAATCGAC GACATAGCAA AGAATGACTC AAATGCAGAA CTTTTCCGGT CTCCTGTAAC CGAAGAAGAT GCTCCCTCTT ATCCCTGCGC CGTACCTCTT TCAATTTCTC TTGACAAAAT TATTCGTCGC TTGAAAGGGG GAAAATCTGG CAGTCAAAGG TGCTATTATC GGAATACGGA TTCACTTCTG TCGGATGTAA GTTCGCTTTT GGAGAATTGT CTGCTGTACA ACAGTCCAGA ATCATCACTC GTTGAAACGG CGGTGGCGCT CGTTTCAAAA ATAAAGGATG AAATTTCTCG GGTTGCGAAA GACCATTTTA AAGAAGTGAT ACAAGCAAAA AAGGCGGACG AGGAAAGAAA AAGTCGTATA CTTAGGCATT GTGAGGCTGT TGATCCTGCT GAAAACTGCG GCATCACGGA TAGTCTGAAG GAGCTGTATG TCATGAGCTC CATAAGGAAG CCTTACAAAG ATCAAATCGA TTTAGAGTGG CTGCAACAAA CGACAGAGAT CGTTGAGAAT CGAGACACCG GCGTTTCTAC GCCACATCGA AGCTGGGTGC CGCAAGCTGG CGATGATATT CTATACTGCC CTTCACTACA TTCAGAATTT GTCAAAGCTC ACTTTAGCTC ACTTGAGCCC TATCAGTGCA TCGTGCACAA TCTGCAAGAC TACAACCTAA AAAACAAGAA TGAAGCCGCT GACGACTCGA CCGCTTTAAC GAAAGAAGGA TTCAGTGACA AATTTCTAGA AGGATGGGTG AAAGGTCGCG TGATTTGGGT ACGCAGCTCG TTCCCAAAAT ATTCAACCAA GAAGGATGGC GTGGAAGCAA AAACGTTTCC TTCGAATTCG TCGATTTTGG TGGCGGGGAT CAAATTGGAG CCTGATTTTG ATGACACCAA GCCTCGGATT ATCTGTTGGA GGCCTTGCAT ATTTGATTAT TCTGTCTGCA AGATTTGTGG TCTATCTACA CAATCGTTTT TCAAGCCTTG CGACGGGAAC GATGAAGCTT TTGAAGAATC AAAGCTGTCG CTTTCGCTGA TTGAGCTGCA AACGATAGAT CGGTGTTTCA ACTTTCTCAA GAAACGCTGC ATTCAAGGAA CCGAACCAAG CTACATCGAC CATCAGTTGA CTAGAGCAAA TGTTCGACAA GGCTATCTCC CTCCGTCTGG CCGGTCCTCT GCAAAATCAC TTCCCGCTTT TGAGCTTGCT TACAAGGACG CGCAAAAGGC GAAGGTGAAA GGCACAAGAG GGGCAAAAGT ATCTGTGTGC CCTGGGATTC CGGAGGCATT GATACGGCAT CTCTTAGATT TTGGATTTCT TGCTCCTTTT GTACTCTCGT CTGGGAAAAG CAACAAGGAA AAGTTACACA ATGACGGCAT GATATCGCCT TGGCCAAAAA TGTCTCTAGA ATTGATACAC TCTCGGGTCA AAAATGGTTT TTATCGCCAC CGGGCTGCAA TTCTGAACGA TGTCATAGAA GCATACTCTT CGGTGGTTTT CCTAGTTCTA GTTGAAGCAG GCAAAAGAAA GCGCTCTCTT CTAAGTATAA GGCGTATCGC TCGAGCTCTG GCAGCTTCTA AAAGTCATAG CAATGGAGAG GAAGAAACAG TGATGGTAGA TACCAAGACC ATTGATCAAG AAGAAATTGA TCTACTCAAA CGGATCCGAA AAATTCGAGA GCTATACGCA ACAGCTCTTG TGGTGGTTTC CGATACAATT CACAGCGAAA GGATTTTTGG GTTGGTCGAC CGACCATCTC TGAAGCATAT ACCAAAATCT ACTGAACCGG TACTGGTTCA GAGCCCCGAG CAGATACAGG CTAGGAAGCG GTTGGAATAT ATCCTATTGG CTTTGAGTCG AGACCAGCTG CAAAACACTT TCCCGTCCAT CGAATCCAAC GGGACAACTT TTCCGACGAT AAAAGTCAAG TTGTCTTTCG GCGGAAAGCT GCTGATGACC AAAATGCGTG TCAGTGTGGA TAAGTTTGCC GTGGGCTTTT TGGGTACCAA AGAAGTGAAT TTGAAGATCA GGCTGAATGG TCGGCAGTTC ACGATGGAGA GAGCCGCTCC ACAGCTTTTG ACAGGAAGCT CGGCTCTTAA TGACCTGTCA ACAAACGATA CAAACACCCG AGATTCAACG AAAGTAGCGA AAGGCAGAGA ATTTAAACAC GTTTTGTGCG ATTCTGTTTG TTTCGACCAC GAAGACTACG AAGGAAAAGA TAGCCTCGTG AAACTTTTTT TCGGAAGACC TGGTAGACTG CATCCTTGTG CTAGATGTCA AGCTTACCGT CGATCTCTAC TCAGTTGTCG TGTACGGCGT TCACATTCAA ATGTGGATTT CGATTGGGTC GAAAATTTCA GCACTACCGG TGGACTGGAA AAGCTGTTAA AGCAGATGAA CCCCGAATGG CCCGAATGGG AAGTCTGTGA GGTTGGAAAA AGCTCTACAG ACAACACTTT AGCATCGGAA AAACCTCTAC CGTCTCCTTT AGAAGAAATC GAGAAAGAAG ATGGAAATGA TAACGACGAC GGGGATGCCG ATGAAGACGG GGATCCCGAT GTCGAAGATG GAACCCAAGA GGTCGATGAA GAAGAGGAGG AAGACGAGTT GGCGTTGGAG TTGGCAGACC CCCAGCAAAT GATTGAGAAA GCTGAGAAGA CACTGTGCCT TGCAAAATCT GTTCAGCAAG AGGCTGACGT ATACTACAAA GCTCCGGTTC GTTTGAGCAA AGCATTTGTC GAAACCGCCT TTCCGATCGA CCCAACGGAC GGTCACTGCG TATATTGCAT TGTGTGTGGA CTGAGCGGCG ACCTGCTATG CTGTGACGGA TGCGCTAACG TTGTCCACGG CAAATGTATT GGATTGACTT CGTTTCCAGA GGGAGATTGG TTTTGCGAAG AGTGTCTTCA CAAGAAGTTG ATACAGAATG GCCTAGTAAC CAATCGACGC CGGGGCAGTA GTGACGCTGC TCCTATCAAA GGCAATGGAG ACTTAAGGTT AGCAGAGGAG AACGGACATT GTCCAAAAAC CGCTGTGAAG TTTGACGCAT TTGGTCGATT CGAGTTCGAC GATGAACATG CAGAGAAAGT GTCGACGCTT CTAGACGAGC TACGTGCTGG ACGGCCCGAG CAACCGCGAA AACGAAAACC TGCACCTGGT CAGTCATTAG GGTCAAACAA AATAGCCGGA ATACAGCGAA GAGCAGAATT TTTGCAACAA CCTATTGTCT TGGGAGGTGA ACTCTCCGGT CTTGTGCCGA TGGCACGGAA GTTTTTGGGT GCGGTGGGGA TTGAAACTGC AGATGCCTTC CTTTCCATGC GGACCACTGA CCTTGCCAAA CGGTTCGCAA CATGGCGTCG CAAGACTGGA ATGGCAAAAT TAAATGGAAG TGGGGAGACG GCATATGTCA GTTCATGGAA AAGCGCGTGT CGGAAACTTT GTGGCGATAT TGAACACAAG ATGGTGTACC TATCCGATCC AGGAGATGAC GACGACGACG GGTCTTATTC TAAACGAAAA GTGCGACGCC GAAAGAAGGG CAAGACTCGC CCGAACACAA CAGGTAATCG ACGGCGTCGC CTTGATCTAC AAAGCCTTAC GGATCCGTTA GAGGCTTTAA GCACCGTCAA CCAACAGTTT TTGGCCACCA TTGATATCTC AACCGCGAAA GAATTTCTCA CAACTCGTAC GGGGGACATT GCGGAAGCAC TCGTCAAGTG GCGAATAAAA GAAGGTCTTC CGCGCTTGAA AGGAAACGGA GAAGTAGCAA CAATCAGTGC GGCAAAGACA TCCTGTCGTA AAATTGCCAG AGAAATGGGC TGGACAAAGG TAGCGGACAT TGAATCTGCA GGTCGGGCAG TATTTCAGAG GAAGGAAATA CGTGAAGAGT CCAACCCGAG AAAGCGAAAA CTCTCCACCC CACAAGTTGC GACTCGACGG CAAGCGAGTA AAGCTAGTGA TGATGTTGAG TCCGACGTGG AAACCGAAAA TGAAGCTGAC GCTCCTAGCC AAGGAGAAAA AAACGGCTTA TCAAAGGAGA AGCCGTTGGC GAAACGTCGG AAGCGAAACA CCGTCGAACC AGTCGTTAAC ACGTCAGTCG CGGTCGTCAC TTGCGAAAGC ACAGGTGCGC GTGACATGTC TCCAATCAAA ACCTCTTGCT CGTGATGCAC GTGCCAAGCT TCACACCAAC ACGAAGGTAC CTCCACCGAC TCCGGTAGCC CGACGCCCTG GTATGCGGAC CTCTCGAACC CCCGACCGTT TCGGTGTCGT TGCTGCGCCT CCGCAGAAGC GACGCCGAAA GGTTTCACCC AAAGACGCCG AAGAGCCCAG TGAAGTTTTC GATCTCGAAT TCTCCGCTGC CACCAATGTG CAAAGCTTGC TTTTGAAGCA AGTTCCCGGT AGGAGAAGAC GTTCCAGGTC CCGAAAGAAG TAGGTAGACG TCGTAACAGT GGCTTTTCCT TTTTCTCAAT ACATTAGTTG TCTTCTAAGA GTTTTTA
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Protein sequence | MDACQTLWAF PLQPTLAKAW VWVWGSGPQP QPPGENLCGF PLRRAHVLAC WTLFPGMVAR SIATFHYYYQ PPTTSATRTS ISISTNVAHR TTATDTFRYV TLIFYHRHHH HYERYDTIQF HTIQSTTIVT IPPVSRVMES TAANETSVKV VVQDQHEEVL EPLESLEVDL DNDEYADIID GDDSVQPESF PPPTPTTRQA LNDFEPTNRE SDDDNNHNNN TESHTRTDHH NAKAGASETE PAGEDDRQLS AYERLRLERI RRNQQKLAQL GLEGRTSAAG GWGPRSRPKK PKLLRKKADE PAQQRSSLSR RTKTEPKNYA EPPNSVSALL RKQGEEAAAA KKDQPLEKKK TKDLSERMER FVHLEFKRIR GHKTLVHKQA KRDLRQAERE LKYWKSIANK QKRREMRKAE NRQSLKTKQE EERRLLGGTI KEVLQQIDAR MPELVQAAAE YDDKYEHKPN GTRKLVADQV FNAVFFFFAQ SAVSLLNTTL LDRAPREPAP TRRSRRSTAE EIVTPLKLAQ NQFTANSPEE EDTYRNVADK EAIAPEDDET SNGRDRPGTK RKRNARNVGG WVSPQFAFEI DRSWLDQDNT KAHFDLYSYV PQTGDTVLYY PAGHRAYVKD YPDILGKKTR QITRLPLWER AVIERDKIDR GEGPKTGDSS LNVWWTDEWL EGIEGDLGKY PILCRVHATN AEFPPDRFTK VIKKGEISWK DPKEQTKRTK ESSRTPLRLA VTLRPLAPVV PPPKESSGDA LASSTQPDLL PSRFKDDQPL ALPPFFTVVT FPSQQKPFIV PFAWAYSISN SLCLDQSVVE KGREASKLHV RSFDTLSDTS YSRLDDRIEA LQVFLKKCTR GPRGKLSLPT DCLESAGMLS LAETNVLLDF FDHFVKDRQS DVSDTQAVVG FFNLVRSTLP LWNGVSVVHS PDEKKDRKIS PWDLSLWKKR MMIPDYSPDN LSDASLSMDD RLRDRIERVI DDIAKNDSNA ELFRSPVTEE DAPSYPCAVP LSISLDKIIR RLKGGKSGSQ RCYYRNTDSL LSDVSSLLEN CLLYNSPESS LVETAVALVS KIKDEISRVA KDHFKEVIQA KKADEERKSR ILRHCEAVDP AENCGITDSL KELYVMSSIR KPYKDQIDLE WLQQTTEIVE NRDTGVSTPH RSWVPQAGDD ILYCPSLHSE FVKAHFSSLE PYQCIVHNLQ DYNLKNKNEA ADDSTALTKE GFSDKFLEGW VKGRVIWVRS SFPKYSTKKD GVEAKTFPSN SSILVAGIKL EPDFDDTKPR IICWRPCIFD YSVCKICGLS TQSFFKPCDG NDEAFEESKL SLSLIELQTI DRCFNFLKKR CIQGTEPSYI DHQLTRANVR QGYLPPSGRS SAKSLPAFEL AYKDAQKAKV KGTRGAKVSV CPGIPEALIR HLLDFGFLAP FVLSSGKSNK EKLHNDGMIS PWPKMSLELI HSRVKNGFYR HRAAILNDVI EAYSSVVFLV LVEAGKRKRS LLSIRRIARA LAASKSHSNG EEETVMVDTK TIDQEEIDLL KRIRKIRELY ATALVVVSDT IHSERIFGLV DRPSLKHIPK STEPVLVQSP EQIQARKRLE YILLALSRDQ LQNTFPSIES NGTTFPTIKV KLSFGGKLLM TKMRVSVDKF AVGFLGTKEV NLKIRLNGRQ FTMERAAPQL LTGSSALNDL STNDTNTRDS TKVAKGREFK HVLCDSVCFD HEDYEGKDSL VKLFFGRPGR LHPCARCQAY RRSLLSCRVR RSHSNVDFDW VENFSTTGGL EKLLKQMNPE WPEWEVCEVG KSSTDNTLAS EKPLPSPLEE IEKEDGNDND DGDADEDGDP DVEDGTQEVD EEEEEDELAL ELADPQQMIE KAEKTLCLAK SVQQEADVYY KAPVRLSKAF VETAFPIDPT DGHCVYCIVC GLSGDLLCCD GCANVVHGKC IGLTSFPEGD WFCEECLHKK LIQNGLVTNR RRGSSDAAPI KGNGDLRLAE ENGHCPKTAV KFDAFGRFEF DDEHAEKVST LLDELRAGRP EQPRKRKPAP GQSLGSNKIA GIQRRAEFLQ QPIVLGGELS GLVPMARKFL GAVGIETADA FLSMRTTDLA KRFATWRRKT GMAKLNGSGE TAYVSSWKSA CRKLCGDIEH KMVYLSDPGD DDDDGSYSKR KVRRRKKGKT RPNTTGNRRR RLDLQSLTDP LEALSTVNQQ FLATIDISTA KEFLTTRTGD IAEALVKWRI KEGLPRLKGN GEVATISAAK TSCRKIAREM GWTKVADIES AGRAVFQRKE IREESNPRKR KLSTPQVATR RQASKASDDV ESDVETENEA DAPSQGEKNG LSKEKPLAKR RKRNTVEPVV NTSVAVVTCE STARRPGMRT SRTPDRFGVV AAPPQKRRRK VSPKDAEEPS EVFDLEFSAA TNVQSLLLKQ VPGRRRRSRS RKK
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