| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43133 |
|---|
| Symbol | |
|---|
| ID | 7196897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 2119853 |
|---|
| End bp | 2121694 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177449 |
|---|
| Protein GI | 219111395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGACGAAAAA GGAGGTGCAC AACGAGACAG AACCGAGATA CCGCAGCATT TCAGAGCACC
TTCCCCCTTT CCACCATTGT ACTGGAACAA GGTAAGAATC CCGACAGGTT TCGAAATCGA
TAAAGGCCAA CGCTTGTCAG GATTTCACAA GCAATAACTG TATCCACCGA CAGTTGATCT
ATCCGTTGAG CTTGAATCCG TGTTAATATC ATGTAAAGTC ACACCGATAC CGCTTATCCC
ATACCTTCTT TTCCTCTTGT TTTCAGAGCC ATGGCGACGA ATGGTGACAA AATCACGATC
TTGTACAAGA TCGTGAACTC GGATTGCGAC AAAAAAGATG TCCTGTTCAA CGCATTTGCA
ATGCCTCGGG GGCCGCGTGG GCCCACATTG GCATCAGTCA AGCAGTAAGT CGAACTATTG
AGGTATGCGA GGGAATCATC GTTGTGTCTG GTTTAATATT TACCATTATT TCGTCTGCAG
GAATTGCGTG GCATTGTACG GACTAAATCA TCTGGGACCC GAGGGATACC ATTGGCGTGT
TTGCGTCGAA GACAAAGCTG GGCCTGGTGA AGCCTCAATG GAGAAATCGT TTAGTTGGTG
GGATATACAG GACGAGAATG CTGCACTTCC CATCAAGTCA GCTTCCCAGT TTCAGTTGCA
GAAATTCTTT GCTCCGCCCG GCACAAACCA TTCGAGCTCA CACGACCCGG CATCCGCGGC
GAAGGGAGCC TTCAAGAGTT TAGGAAAGGC CATGAGCCAT GCTGTGTCGG GATCCGACGA
TCACGGCCCG CCCGCCAGCG TTATTGCCTT CAAGCTTTTG GACGTTGTCA AGATGCACGA
CGACTTCACA ACGAAGAATC ACGGACGCGG TGGACATATT CCTACGCCGC ATCGTCGTAC
CCCCGCATCG GCAACCCATC CACCCTCCAA CGCTAGAGTT GCGGCGCCAG CAGGTGTGCC
GCAGCAGCAA CGCCAAGCAC CACAACGCGC ACCAGCTCAG GCTGCACCGC CACAACAGCA
ACGCGCGCCT ACGGTACCCG CAGGCGAGCC GTCACTCATG GATTTCGGCG CGACCCCGGC
AGGAGGCGCG AGCCGCACCT TGCATCATAG AAATTCGTCG CCGTCGACAT TCAATCGTCC
CGACGAAAAC CTCTCGAAAG CACAGCGAAT CCAGCAACAG TATCAGAAGC AAAAACAGAC
ACAGAGTCTG GTTTGGGACG ATATCGAGCA GCGCTATGTG CAGGAGGGGA CCATCGAAGG
TAAAGGAGTT GGTCGACAAT CTTCAATGGG ATCTATTTCA TCCAATTCTA GCGGCAAAAA
GAATGTTGGC ATTTCTCTCG ATGCTTCTAA TGCGATTGGA AAGTCAGCAA ATGTCCAGGC
AGCGGTGAAC AAGCGTGTAA ACGAAATGCG GAAGTCTCAG CAACAGGCCT TGGACGAGGT
TCGACAACGT GAAGAAAAGA AAAAGTCGGA CGATGATGAA GAGGATGCCG TACGAAAACG
CTTGGAGCCC AAGATCAAAG CATGGAGCGA GGAGTACGGC AAAAAGAAAC AGCTTCGCGC
GCTCTTAGGC TCATTGCAAA CGATTCTTTG GGAAGGCGCG AAGTGGAAAC CCGTTGGTAT
TGGCGATATT ATGGATAACA ACAAGGTGAA GCGCTGTTAC CTAAAGGCTA CACTTGTTGT
GCACCCCGAT AAAACACACC ATTTAGATGC CGAAAAGCGC TTCCTGGCTA AGCGAATATT
CGATGCTCTC AGTCAGGCCA AGAAAGATTT CGACGAAGGC AAATAGTAGA CTACAAATCG
GGATGAACTC TTTAGTCCCT GAAAGTAAAG CCGTCAGACA TG
|
|---|
| Protein sequence | MATNGDKITI LYKIVNSDCD KKDVLFNAFA MPRGPRGPTL ASVKQNCVAL YGLNHLGPEG
YHWRVCVEDK AGPGEASMEK SFSWWDIQDE NAALPIKSAS QFQLQKFFAP PGTNHSSSHD
PASAAKGAFK SLGKAMSHAV SGSDDHGPPA SVIAFKLLDV VKMHDDFTTK NHGRGGHIPT
PHRRTPASAT HPPSNARVAA PAGVPQQQRQ APQRAPAQAA PPQQQRAPTV PAGEPSLMDF
GATPAGGASR TLHHRNSSPS TFNRPDENLS KAQRIQQQYQ KQKQTQSLVW DDIEQRYVQE
GTIEGKGVGR QSSMGSISSN SSGKKNVGIS LDASNAIGKS ANVQAAVNKR VNEMRKSQQQ
ALDEVRQREE KKKSDDDEED AVRKRLEPKI KAWSEEYGKK KQLRALLGSL QTILWEGAKW
KPVGIGDIMD NNKVKRCYLK ATLVVHPDKT HHLDAEKRFL AKRIFDALSQ AKKDFDEGK
|
|---|
| |