Gene PHATRDRAFT_43101 details

Gene Information

• Locus tag: PHATRDRAFT_43101
• ID: 7196878
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 2033437
• End bp: 2035838
• Gene Length: 2402 bp
• Protein Length: 330 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177429
• Protein GI: 219111355

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGCCATATG CGATATCGGT GTTCCGGGCG AAGCCAAAGA ACAGAAGTTT TGTTGGATGA 
GATCGCAAAA CTCTAAATGC GCGAAAGAAA ACAATGGGAA ACCATGCCTA TGGAAGTCGT 
CAGCGGGAGA CGGTATCAAC GATAGTCCGT CGTTGGACGC AGTCCATCGA CGCTTCGCAA 
GCAGACCACA AAAGAAAGAC TTCTTCTCTC TTTGTTCCAC TGCGCTTGTG GTGGCCCAGG 
AATTTGCTCT AAGTTGCTTT TTGCTAGCTC GGCATCGTGT CGCACTCTAT TTCGAACAAT 
CCCGATCAAC CCCAGAAAAT GCGTTTACAA TCAGTCAGAC CAACTTAGAC CAAGCGACCG 
TTGCCATGTC TGCGGCCCTC ATGTTGGTGC TGTTTTGCAG TAGTCGCTCT AATACAATTC 
CGCGACAGAA ACGAAGAGAG AAAGCTCAAC AGCGCTTGTC GGACGCAATT CTGCTTGGTA 
TTGTACTCCG TCTCCTTGCC AGCGTTTTGC GAACCTTGAC AGCTTCTTAC TCCTCCGATA 
CTGTCGAGGC CTTGGCCACT ACAGGTATGA CTTTGCACGT TGTAGCGTGT GACTATTCGT 
ACGCCAACGG CCGACGTCCC CATGGAGAGA TAATTCGTCC TTTGATATCG TCGCAACGTC 
CGGTCTTTCG AGGAGGCACC TTTTCTCTGA ATGCGGCTCT GTTTGCGACA ACACTATTGG 
TGAGCCGGGT GGAATCCAAT AGCATGGCAT ACTTTTTAAT ATCACTTGCA ATCGTCATGT 
TCGCCTTTTA CCCCGACGCA AGGCACGCTA TCGCCAATAG CTATCCCCCA TCGAGGAGCG 
GTACGTCCGT GAGTTGCTAC ACATTTTCAA CTTCTTTGAT ATATTCTTGT GATAGCACTT 
TTGATGGCAA TCCCTTTCTG TATTTACTAA ATCTGCTGCT TCATTCCGTC TCAACTCCGA 
AACTCAGGAT TCCCGTGGCT AATTACAGCA GCAATCTCGG GCTCAACTTT GGTGTTACTG 
AACAACCACG AAAAAATACT TTTCTTAGTA GGCATGACAT CGCTAGTTTT TGTGGTACCA 
TTGTGGAATT ATATCTCTCA GTGCAACAAG GTGTGGTTTC GTGGACCCTG GGACATACCG 
ACGCGTTCTT CAATGAAGTT GGACAATAAA TTGTGAGGGT GATGTCACCA GCTCATGCTT 
GTTCGATTCC TCTTCTAGCC GTCATCAAGA TAAAGAATCA AAGACTCTCC TTTCTCTGCG 
ACCTTTCCTC AAGATGGGAA AGAAGGAAGG GAGCCTTCTC TCCGTTGATA TTTTCAACAA 
CAGGATTTGA AGTAATTTTC ACTTAGTGGA GATTTGCCCC CTTTGCAAGG AGGATCTGTT 
TCATCTTCCA GTCAAGATGG CACGAAATTG GGTAGCATTT CTCGTCTTTT TGCTGTCAAA 
AATATTACAT GTGATTCACC TTATCAATCC GGTGACAGGC CAAATGGTAC AAATGTCCTC 
CAAAGCATAC TGGAGTGAAC CATTTTTGTC CCTTGATTAA GGCCGCCTGT TCTCGCATGA 
TGTGTTACAT TGTGCTGGGA AAGGAAGTGG TATTTTTAAG AACAATCGTG TTACGGCGAA 
TGACAAATCT CAAACAGGGT TCCAAATGAG CTGGTGTCGC GTTGGCATGT GAAGACAATA 
TGGGTGTCAA CAATCATCAG TACAAGGAAC AATCGCACAT GAGCTATCTA ATGAAAGCAG 
GTGATGTTTG CGTTGGCTAC AATTTGAAGG AAACACAATT ATCAGCGACG AAGCCGATTC 
GCTTCGATCT GAATTGAAAC TCCTTTGGCG CAACTTTTAC GGAGCCGTCG CTAATGAAGA 
ATCTGACGCT GTCAAAAGCG GCAAATGTGG CGCCTTCAGC GCTTGGATGT GGCCGTTGCC 
GAGACAGCAG CAGCAACTGG TAAGGTTGTC AAACACGCTG TCGAAGCCGA TGAAATGGAC 
AAAGAAGATT TCTGCAGGAA GTTGAGGCGG ATAATGGCAT GCGCTTGAAA ATGAATATTT 
ACTAGAGCGA AAAAAGATGC ACCAGCCACT ATGGGAGTGG AAGGAGACAC TACTGAAGAT 
GAAGACGGCA AGGACGATGA AGATGACCCA CAGATCACAC TCGACGAGTT GCTAGACGGG 
CTGGTTTGCA CCAAGGCCCG GAAATTGACA TGGTTGATCC GCAAGTCCTC GATCCACTTG 
TAAAGGGCGA AAAAGCAGCA AAAGACGGCA TTCGAGCTAG GAACATTTGT TACAAGGATG 
CGGCTGTTCC AGTCTCGAGT GGATGGGGGA ATCAATTCCC AGGCGGGTTT GTGCAATAAA 
GTCGGCAAAA ACCTTTCAAT ATTGATGTCG TGTCCCCAAC TTTCACAGTG AGGAGTATGC 
AG 

 

Protein sequence

MRSQNSKCAK ENNGKPCLWK SSAGDGINDS PSLDAVHRRF ASRPQKKDFF SLCSTALVVA 
QEFALSCFLL ARHRVALYFE QSRSTPENAF TISQTNLDQA TVAMSAALML VLFCSSRSNT 
IPRQKRREKA QQRLSDAILL GIVLRLLASV LRTLTASYSS DTVEALATTG MTLHVVACDY 
SYANGRRPHG EIIRPLISSQ RPVFRGGTFS LNAALFATTL LVSRVESNSM AYFLISLAIV 
MFAFYPDARH AIANSYPPSR SGFPWLITAA ISGSTLVLLN NHEKILFLVG MTSLVFVVPL 
WNYISQCNKV WFRGPWDIPT RSSMKLDNKL