Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43076 |
Symbol | |
ID | 7196862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1964848 |
End bp | 1965646 |
Gene Length | 799 bp |
Protein Length | 257 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176882 |
Protein GI | 219110261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.428415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTC ATGCAGAGGC GCTGCGTTCG GACCCGTATA CCAGCAATGG AACTTTCTCC GCAACGAATC GACCGGGCTG CTACGAGTTG CTGAGTCGGA TGTGGATTCG AGCAACAGAT GGTCTTGTTG CCGACCGCTC GAAAGGGGAT GAATGGTTTG GTCGTCTTTG GAAATTGCAT ACGGAAACAA CACGCTTTTA TCATACAGCG GTGCATCTGG AAGAAATGCT TCACTTTTTT CGAGTGCTCG AGGAAAGGGG TTGTATGAGC GGTGTCTCGG AAACAGAACG ACAAGCAATT TTGCTCAGTA TTTTCTTTCA CGATGCGATC TACGAAAGCC GTTCTAGTTC CAACGAAGAA AATAGCGCCC AGCTCTTCCA AGAGTTCTGT CGGGACACCA AATCGCCGGA CGCGGTGGTA AACACTCTAG TTGACGAATT CATTTTGGCC ACCAAAACAC ACATGACATC CGACAATCAT ACTGTTGCTT TGGCTACTTT CCTGGATCTC GATATGGCGG TTCTGGGTAA ACACCTCGAG TCTTACATAT CGTATGCATC AATGATTCGA AGAGAGTACG ATTTTATTCC CCATGATACA TACTGCCAAA AAAGAGCGGA TGTTTTGGAG GCGTTTATGG GGAATAGAGT ATTTGGTACC AAAGTCATGT ACGATGCTTT TGAGGAAAGG GCAAAGGAAA ATGTTCGATA CGAAGTGGAC CTTTTACGAG CTGGAAGCAT ACCAAAAAAA CTTGTTAGCG TTATGTTCAT ATAGCTGTAG CGTTGAGCCT GATTTTTTA
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Protein sequence | MDAHAEALRS DPYTSNGTFS ATNRPGCYEL LSRMWIRATD GLVADRSKGD EWFGRLWKLH TETTRFYHTA VHLEEMLHFF RVLEERGCMS GVSETERQAI LLSIFFHDAI YESRSSSNEE NSAQLFQEFC RDTKSPDAVV NTLVDEFILA TKTHMTSDNH TVALATFLDL DMAVLGKHLE SYISYASMIR REYDFIPHDT YCQKRADVLE AFMGNRVFGT KVMYDAFEER AKENVRYEVD LLRAGSIPKK LVSVMFI
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