Gene PHATRDRAFT_43076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43076 
Symbol 
ID7196862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1964848 
End bp1965646 
Gene Length799 bp 
Protein Length257 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176882 
Protein GI219110261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.428415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCTC ATGCAGAGGC GCTGCGTTCG GACCCGTATA CCAGCAATGG AACTTTCTCC 
GCAACGAATC GACCGGGCTG CTACGAGTTG CTGAGTCGGA TGTGGATTCG AGCAACAGAT
GGTCTTGTTG CCGACCGCTC GAAAGGGGAT GAATGGTTTG GTCGTCTTTG GAAATTGCAT
ACGGAAACAA CACGCTTTTA TCATACAGCG GTGCATCTGG AAGAAATGCT TCACTTTTTT
CGAGTGCTCG AGGAAAGGGG TTGTATGAGC GGTGTCTCGG AAACAGAACG ACAAGCAATT
TTGCTCAGTA TTTTCTTTCA CGATGCGATC TACGAAAGCC GTTCTAGTTC CAACGAAGAA
AATAGCGCCC AGCTCTTCCA AGAGTTCTGT CGGGACACCA AATCGCCGGA CGCGGTGGTA
AACACTCTAG TTGACGAATT CATTTTGGCC ACCAAAACAC ACATGACATC CGACAATCAT
ACTGTTGCTT TGGCTACTTT CCTGGATCTC GATATGGCGG TTCTGGGTAA ACACCTCGAG
TCTTACATAT CGTATGCATC AATGATTCGA AGAGAGTACG ATTTTATTCC CCATGATACA
TACTGCCAAA AAAGAGCGGA TGTTTTGGAG GCGTTTATGG GGAATAGAGT ATTTGGTACC
AAAGTCATGT ACGATGCTTT TGAGGAAAGG GCAAAGGAAA ATGTTCGATA CGAAGTGGAC
CTTTTACGAG CTGGAAGCAT ACCAAAAAAA CTTGTTAGCG TTATGTTCAT ATAGCTGTAG
CGTTGAGCCT GATTTTTTA
 
Protein sequence
MDAHAEALRS DPYTSNGTFS ATNRPGCYEL LSRMWIRATD GLVADRSKGD EWFGRLWKLH 
TETTRFYHTA VHLEEMLHFF RVLEERGCMS GVSETERQAI LLSIFFHDAI YESRSSSNEE
NSAQLFQEFC RDTKSPDAVV NTLVDEFILA TKTHMTSDNH TVALATFLDL DMAVLGKHLE
SYISYASMIR REYDFIPHDT YCQKRADVLE AFMGNRVFGT KVMYDAFEER AKENVRYEVD
LLRAGSIPKK LVSVMFI