Gene PHATRDRAFT_43068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43068 
Symbol 
ID7196857 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1951702 
End bp1952912 
Gene Length1211 bp 
Protein Length349 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176879 
Protein GI219110255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.150717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGTTGTAGA GCTTCGGATG GCCTCGTAGA AAGAAGAAAG CGTCAGACGG ACCGCTCGAT 
GACGGGCCAT CGGTCAGCAT CTGCTCCAGA ACAAGAACAC ACACATTCAC TTTCAGTCCC
AATCTCGCTC GGTAGACCTT CTTTACGCCT CAGACTTGAA GCATATTATG CATTGATTTC
GCCCGACCAA ATATCTAACA ACGCTTCTTG GAAAGAACGC TTTAACCAAA TTTGGAGAAA
ATTCGGAGGA TCTGTGGAAG GCGAACGGAA TCTTGCTACT AAGTTGTCCA AAAAGTATGG
CACCGCTATC CGATTACAAA CCGTAGACTT GACACGAACA ACTGCCGCGG ATACGGGGAC
GTCGAAGTCG GCGTGGAAAA GGAAGGAAGC CTATTACGAT CCAAAGCAAT CGCAACAAAA
GAGTGGAGTT TTGGACTTTG GCTCGCAGAG ATTTGATCCC AATGCAACCC TAGCAGCGCC
TTTATCACAT GTTGAGCGCG ATAATGTGTT TGTCGTGTCT TGTCCTTTGC TTGACCGTGT
CGAACTTTGT AAAGGGCTCC TTCCTTGCTC AGATCCTCTA TATCAACGAT CAAAAAAGAG
AGAACGATCG GGCATCTCTG TGCAAGTAAA AAATGATGAA TCGACGAAGA AGGTTAAACC
TCCCTCCTGT TTCGCAGAGA TAGCCCAGGA TCTCCAAGAA GGTCCATTTG CACTGATGTA
TAACACCTTT GTCCACAAGC AGCGCGTTCG CGTTGTTCTT CGGTACGTGA ACGGTATACG
AGGCATAGTT ACGGGCTATT TGGTGGCGTT TGACAAGCAT TTCAACCTGA TCCTTCGAGA
TGTCGAAGAA GTCTATTCGA AGCGAGCTGA ACGAGGATTT GAGCAGTCCA ATGCTGAAAT
GGAGTTGCGT CGTCGACGAA CAAATCTTTA CCGAGCAACG GATCATCTCG ATTGGTGTAG
TAGGCGTCGC TGTATGCGTC AAATTATGGT TCGGGGGGAT AACGTCGTCA TTGTTTACCG
TGCAAAAGAT GAGCGCTCTG CCTTGCACGA AAATTCAAGG TGCCCGCAAG AAAGTCGTTA
TAGAAGAAAG AGCATAAAAA GAGTGCCGAC AGAAGAACGC ATTGGGACAC CCGGGTCATT
GATATATTGT GTACAACGAC AGCCTTTTCC AAGGTGACCA ACACGTCAGT GCGAATGATG
CGCCTCAGTA A
 
Protein sequence
MTGHRSASAP EQEHTHSLSV PISLGRPSLR LRLEAYYALI SPDQISNNAS WKERFNQIWR 
KFGGSVEGER NLATKLSKKY GTAIRLQTVD LTRTTAADTG TSKSAWKRKE AYYDPKQSQQ
KSGVLDFGSQ RFDPNATLAA PLSHVERDNV FVVSCPLLDR VELCKGLLPC SDPLYQRSKK
RERSGISVQV KNDESTKKVK PPSCFAEIAQ DLQEGPFALM YNTFVHKQRV RVVLRYVNGI
RGIVTGYLVA FDKHFNLILR DVEEVYSKRA ERGFEQSNAE MELRRRRTNL YRATDHLDWC
SRRRCMRQIM VRGDNVVIVY RAKDERSALH ENSSLFQGDQ HVSANDAPQ