| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43027 |
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| Symbol | |
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| ID | 7196233 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1832612 |
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| End bp | 1834164 |
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| Gene Length | 1553 bp |
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| Protein Length | 414 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177382 |
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| Protein GI | 219111261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.256203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTATCC TCTCTACAGC AAGACAGTGA ATTTCTCAGC ACTCACTGTC AAGCACGTCA
AAGTTCTAAT TCATCCAGAT AGATCGAATT GAATGGTGGC TTGGATTCTC GCTGCCCTGT
TTCATCGGCG GAGGAATCGA AATGTGAACA GCGACGATAG GGAGTTTGTG AGTGTTCGTA
TTACCAATTC GGTGACCAGG AACATAAGTG ATGCTACGGT TTCCGTTGAA GATCGGGGGC
GTTTGCCGCT CCTTTATTCT TTATCTCGAA ACTGGGCATG GGAGGCAATA AATTTTCGAT
GCCGGACTCA CCCTGAAGAG GCAAGCGCCG ATTTGATCGA CGCTAGAGGC GACAATATTC
TTCATTGGTG TGCATTCGGA CATCCCCCAA TCAATACGAT CGAAACTATA CTAGCAGTTT
CTCCACAACT CGCGGCGGTT AAAAACAAAC AAGGCCAAAC TCCACTTCAT GGTACGGTTT
TGTGTAGATT TGGTGGAACC TGGATTCTGA TTTTGTCTCT CTCACTTGTT CATTTCGCCT
AGTTGCCTGC TCTTATCGTG CATCGCCGGA TATAGTTGCA GCTATAATTG AATCGTATCC
TGAAGCAGCT GGTATGGCTG ACGCATCCGG TTCATGTCCT TTACATCTGC TGTGCGACTA
CGGATGCTCA ACAGAGTCTC TGCGTTCCGT TTTGCAGACT ACAGCAGGAT CGTCGACTGT
TCTCAAAGCC GATCGAGCAT ACCAACGAAG GCCGCTCTAC ATTTTAAATG CTCGCAAGAA
TCTTTACGAG TTCCAGCGCT GGCTCAAAGA CACCCGAGAC GTTCGATTAC GTCAAGTCGC
TATTCGTCAG AAAAAGTGTG CCGACATGGA ACAGATTCAG CAGCTGGAGG AAATCGTTGA
TGCACACCGT AATCTCGAGT TCTGGCAAAA GATCTCTTTG CTTCTGTACG TTGAATATTA
CGGCTGCGAA AGCATAGACG ACATTTCTGA CGACCAAGTT TTGCACGCCG CTGTTGGGGT
TGCCGACTGC CCGCCTTCAC TGAGAGAGCT TGCAATCGCT CTGAATGCCC ACGAGCTTTT
AACGCCTGAT AAAGTCGGTC GCCTTGCAAT TCAGGTTGCA ATTGAACAAA GTCGGTATGA
CTTAGTTATA GAGATGCTTC GTCTGCAACC TAGCGTTGCG CAAACGCGGA ACCGTCAAGG
CATGTTGCCA TTGGCATTGG CTGTACGGCA TTTCCAATGT CCCAGTTGGG AAAAGGGTAT
AGGGCTTCTA GTTGAATTAC ACCCCGCTGC CTTGGAAGAA GTTGAATTGG AAGACATTTT
CATTCCCTTG GTGTGGTCGA AAATATCATC AGTTTGTGCT CTTTTTAACG CTGTCAGATC
AAGACCGAAT GTATTTGCGT GCCAATGATT TTTTTCGACA GTACTTTTTA AATGTTATGC
AAGTTGTTGT CCATTCGATA CCGCACCAGA AGCGTTTTTC GAACCGTTGC TTTTCACTGT
CAAGATCGTT TCTTACAGAT AGATAAGTTA TGAGGGAGTT ACTTCACAGT TTG
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| Protein sequence | MVAWILAALF HRRRNRNVNS DDREFVSVRI TNSVTRNISD ATVSVEDRGR LPLLYSLSRN
WAWEAINFRC RTHPEEASAD LIDARGDNIL HWCAFGHPPI NTIETILAVS PQLAAVKNKQ
GQTPLHVACS YRASPDIVAA IIESYPEAAG MADASGSCPL HLLCDYGCST ESLRSVLQTT
AGSSTVLKAD RAYQRRPLYI LNARKNLYEF QRWLKDTRDV RLRQVAIRQK KCADMEQIQQ
LEEIVDAHRN LEFWQKISLL LYVEYYGCES IDDISDDQVL HAAVGVADCP PSLRELAIAL
NAHELLTPDK VGRLAIQVAI EQSRYDLVIE MLRLQPSVAQ TRNRQGMLPL ALAVRHFQCP
SWEKGIGLLV ELHPAALEEV ELEDIFIPLV WSKISSVCAL FNAVRSRPNV FACQ
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