Gene PHATRDRAFT_43026 details

Gene Information

• Locus tag: PHATRDRAFT_43026
• ID: 7196831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1829241
• End bp: 1831656
• Gene Length: 2416 bp
• Protein Length: 493 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002176854
• Protein GI: 219110205

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.155267
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATCTAACCC TTCCTTGTTG ACGTTCCTTT TCCAAACATA CCGTATGGCT GCTCCTGCTT 
CTACTCCGTC GGGTTCGGCG AGTCGAGACG CCACCAAAGA AGACTTTGGC CAACCGGATC 
CGGTGGGGGT CTCCGTCCAG CCGGCTCCGG GCAACCTCAA GGCCCCGCCT CCGGCTCCTC 
CGGTGGTCAC CAAGAGGCAC GAGCCTTCGT ACGGGGATTC GGAAGGCTCG GATCATTACA 
CCGTCGCCAA GTCTCTCTTG AACGATGGGG ATTTCGAAAA CGCGTTAGCG ACGATTGAGG 
AAGGTATCGA GAAGACTCGG AACGATTTGG AAGCCCACGA CCCGGAGGCG GATCCGGATC 
GACTCGCCTT GCATCCAGCC ATGGCACCCT TTCACTACCT GTACGGTACC ACCTTGTTGT 
ACAGCATCGA GGAATCGACG GACACACAAG CCATGGCGAT GCCCCACGCG AGTGCCGAGC 
AGGAACCGCA AGGAGGCGAT ACCAACGGAC CCAACGACGG CCAACATACG GACCTCCCCA 
CAGAAGAAGT CGCCGACGAA ATGCAGATTG CCTACGAGAA CTTGGAAGCC GCGCGTGTTA 
TTGCGGAAGC ACTCCGACTT TCGCAGCCGG AAAATACGAA ACTGCAACTA GACCTGGCCC 
AAATCTTCCT CCGCGAAGCC GATCTACAGC GCATGAACGG ACAGTACGAT GCCGCGCTGC 
AAGATTATAC TTCGTGTCTT TCTTTACGAC AGTCCCTACC GGAAGCGCTG CTCGGTCCGT 
ACGATCGCAA AATTGCCGAC GTCCACTACA ACCTCGCTCT CGTTTACAGT CTAGCGGTGG 
CGGAAGCCGT CAAACCAACG GACGATCCTC ACGCACTACA GCAGCATAAC GAACGACTGG 
CGCTGTACCG CAAACGATCC TGTCATCACT ACGTCACTTG TGGTAGAATT CTATGCGGGC 
AAATAGCTGC CTTGGCCGGT CAAGATCCGG ACACCTTTTT GCAAAAGGCT CTCGATGATT 
TACCGTCCTT CAAGAGTACC GGCGAAGAGG ACGGAGCGAA TGACGAAAAC GATCATCCCA 
AATTGGCCAG TCTCAAGCTC CAAACCTTAC GCCGGCACGC CGCACAGGCC GCCACTAGTA 
TGACATCACT GGATGCTCAA GAAACTGCCC ACGAACTGCT TGATTTGCTG CAGGAAATCC 
AAGAAACTAT TGATGAGTCG GAAAACTCCG AGCAAGGCGT CCAAACGGTC GCCAGCATGA 
AGGCGGAGAT ATCCGCCGCT GTAGCAGCCC AGCCTGGTGA CGACGACGAG GAAGGTGCCG 
GCACAGCCCT TGGCCTTGAA GATTCTAACG CTTGCACTGC CACCACGACA ATCGGGTTTG 
GCAGTAGTGC CGCCAGTGAA AGTACGGAGG CAGTTATCCC ACTGCTGGCT GTCCGGAAAA 
AACCCAAACG CACCGCCGAC GATGCCAAAC TGCCCGCGTT GGACGATTCT CGAAAAAAAA 
CGTCGCCAAG TAACACGAAG AATTGAAGAC GGGATTTTTA TAAACACAAG CAAATTTTCC 
TTCGCAGTCT TTTGAATGGC ACTTTACATT AGGAGTGTTT GTTGCAAAGA TGGATTTGGT 
GTGCAAGTGG AGCAATCGAG TTTCTGGTAT CTCGTAATAG CGCATTACAT GGCTCTTTGT 
TGCCTCCAGA CAAAACACAG ACAACAGTCT CCATTATTTA AATCCTTGTA GGGAACCTTT 
GTTACCAATT TGAGCATCAG TAAACTAGAT TGTTGGCATG TTGTAGACTG ATTAGCTCTG 
TTGCAAAAGA GACGGGTGGT TGGCAAAGCC ATCTCCATTT CGAGAAATGA TTTTGTGTTA 
TAGAGCGCGC TTGTTTGCTT GCACAACAAA GCAATGACCA TGGTTTGCGC TCTCGTTGGT 
ACAAAGAGCA AACTGACTAG AGGCATCAAT TGGCATCCTG CAGACTGATG ACTTGAAAAG 
ATTCAACATG GGTATTTCCT TTCAAAAACC TCTAGAGAGG CACCACTCAT CTTGCCACAG 
GTAAAGCAGG CCACGCGTCA TGGCTTTTGA ACTAGGATTG TGAGCCCCTG TCTATGTTGC 
TGGAGCCCCT TCTTCTAAAA CCACTGTCTT GGAGATAACG AAACAGCCTT TTGTCTTCTG 
ACTCCAATAT GCTAGGCTTT ACAGGAATCA CTCCAACTTT CACTATCAAT TGTTTCTTGT 
AGACAGTTTT GCAAGATTGA AACTTCCTGT GGTGTTTATC GCTTACAGTG AATCACTTTG 
CTAAGTGTAC ACTATGTCCC ACAAGATCTC AGGATGAGAA TTTAGCGCTA CTTGCAAGAC 
AGTCATAGCT AGGTATCAAC AACTCCAGAT AGTTTTGAAA GTTCGGCAAA TGGATTGATG 
TCAATTGTTC ATTTTC 

 

Protein sequence

MAAPASTPSG SASRDATKED FGQPDPVGVS VQPAPGNLKA PPPAPPVVTK RHEPSYGDSE 
GSDHYTVAKS LLNDGDFENA LATIEEGIEK TRNDLEAHDP EADPDRLALH PAMAPFHYLY 
GTTLLYSIEE STDTQAMAMP HASAEQEPQG GDTNGPNDGQ HTDLPTEEVA DEMQIAYENL 
EAARVIAEAL RLSQPENTKL QLDLAQIFLR EADLQRMNGQ YDAALQDYTS CLSLRQSLPE 
ALLGPYDRKI ADVHYNLALV YSLAVAEAVK PTDDPHALQQ HNERLALYRK RSCHHYVTCG 
RILCGQIAAL AGQDPDTFLQ KALDDLPSFK STGEEDGAND ENDHPKLASL KLQTLRRHAA 
QAATSMTSLD AQETAHELLD LLQEIQETID ESENSEQGVQ TVASMKAEIS AAVAAQPGDD 
DEEGAGTALG LEDSNACTAT TTIGFGSSAA SESTEAVIPL LAVRKKPKRT ADDAKLPALD 
DSRKKTSPSN TKN