Gene PHATRDRAFT_43016 details

Gene Information

• Locus tag: PHATRDRAFT_43016
• ID: 7196229
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1801809
• End bp: 1805526
• Gene Length: 3718 bp
• Protein Length: 1066 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002177376
• Protein GI: 219111249

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAACTACGA GAAGGGTATA CGACGCCGCG TCTCTACCTT TTACTCTACA GGAGCCAATC 
CTACCGCTCT CCGCTCTCCT AGTACTCTCA TTGTACGGCA CCAATCGTTT CGGCATCGCG 
AGTAGTTCAC TGTCGAATCA TGTCGGAAGA ACCACCGGTG GGGGTCAATC CGAATGCGGA 
AGATGAAACT CCCGCTCCAG AAGGGGAGAA GAAGCTATCG AAGAATCAAC TGAAAAAGCT 
CGCCAAGGGA AAGGTACGAA GCGGCCCTGG GCGAACTCTG ACGTTTCGGG TCGAATGCGG 
GTGTTTAAAT ACCAGCTTAC CTTTTCTCTT GTCCATTCCG TAGGACAAGA AAAAGAAAGA 
CAAGCCTCAA TGGAACGCGC CGAGTAAGGA AAAAGTCAAA GCTCCGGTCG CTACGACTTC 
CTTCGTCAAC ACGACCCCAA AAGGGGAAAA GAAAGATCTT TCGGCTCCCA TGGACGCCGC 
ATATCATCCG TCAGCAGTCG AAGCCGCTTG GCAAGACTGG TGGGAAAAGT GTGGTTACTA 
CAGCTGCGAT CCGAAAGATG CGGTCGATCG CCCCGTAGAT GAAAAGTTCG TCATGGTGAT 
TCCACCACCG AATGTGACTG GATCGCTGCA TCTCGGACAC GCCCTGACGG CGGCCGTCGA 
AGATACCCTG ACGAGGTGGC ACCGGATGAA AGGACACGCC ACTCTGTATG TTCCCGGTAA 
GTTTCCATAG TGCATTTATT CGTTCGTTCG TCGTTGGCTT CTGTTTCCCC ATCACGCACG 
GGTCCTCTGG GCAGCCACGG GTGAAATCAA TTCACAATAG ATGGCAATCG GCTCCGTGCA 
AAAATTTACG CAAAACAACC CCTCGCACAA CGAGTTCTTC ATCAACGCAC TATTACTCAT 
TGTTTTCGGG GCTGACATTT CACAATCACA GGTACGGATC ATGCAGGAAT TGCCACGCAA 
TCGGTGGTCG AAAAAATGCT CATGAAGAGC GAAGGAAAAA GCCGGCACGA TTTGGGGAGG 
GAAGAATTTG TGAAAAAGGT GTGGGAATGG AAGAAGGACT ATGGAAGTAA GATCACCAAT 
CAATTGCGAT CATTGGGCAG CAGTGTCGAT TGGTCGCGTG AACGGTTTAC GATGGATGAA 
ATGTTGAGTA AAGCTGTCGT CGAAGCCTTT AATCGATTTC ACGAAAAGGG ACTCTTGTAC 
CGTGCGGATC GTCTAGGAAA CTGGTCGTGT GCATTAAAGT CCGCCATTTC CGATATCGAA 
GTCGACTTTA TTGAACTCGA AGGCCGTACC TTTTTGGACG TCAAAACACA TAAGGGCAAT 
CCCAACGACC CCAATGGTCG GTACGAATTT GGGACCTTGA CTTCGTTCGC CTATCCGATT 
GAAGACTCAG AGGAACAGAT TGTTGTTGCC ACTACCCGAC TGGAAACCAT GTTGGGAGAC 
ACTGCTGTTG CCGTTCACCC GGACGATCCT CGATACACCC ACTTGCACGG GAAGCATCTA 
ATCCATCCCT TCAACGGACG CCGAATTCCT ATTGTTTGCG ATAAAGAACT GGTCGACATG 
TCCTTTGGTA CCGGAGCAGT CAAAATTACT CCCGCCCATG ATCCAAACGA CTACGAGTGC 
GGTAAACGTC ACGAGCTGGA GTTCATCACA ATGTTGACTG CGGATGGTTC AATCAACGAA 
AATGGTGCCC CTTTCACCGG CATGATGCGG TACGACGCTC GCATTGCGGT AGAAGATGCG 
CTTAAAGAAA AGGGATTATT CAAAGGCAAA GAACCCAACA AGATGCGATT GGGTCTATGT 
TCGCGCTCGG GTGATATTTT GGAACCCATG ATTACTCCGC AGTGGTATGT TAACTGCGAC 
GGTATGGCTA AGCGGGCTAC CGATGCGGTA CGCAATAAAG AGTTAACAAT TCTTCCAGAG 
GAGCAAGAGA AGACGTGGTT TCATTGGTTG GATAACATCA AGGACTGGTG CGTCAGTCGA 
CAACTCTGGT GGGGTCACCA GATACCGGCA TGGTTCGCCA CCAAGAAGGG AGAAAGTTTA 
GAAAAGAATG ATATGGCCAA CAACGACCGG TGGGTTGTTG CTCGGTCCGC TGAGGTAGGC 
AATAGGATGA AAGCATGCAC ACATTTTTTT GTTGCCGTAC TTCGTCTCAC AATACTGTAT 
CTCGCAGGAA GCTCTCGAGA AGGCCGCTAA ATTACTTGGC TGTCCCGCTG GCGACATCTC 
AATTGAGCGG GATGAAGACG TTCTTGATAC GTGGTTTTCC TCTGGACTGT TTCCTTTTTC 
TGTCATGGGA TGGCCCGATG ACACTTCTGA TTTGAAGGCG TTTTATCCTA CGTCTCTACT 
CGAGACTGGT CTCGATATTC TCTTCTTTTG GGTGGCTCGT ATGGTTATGA TGGGTTTGGA 
ACTAACCGAC ACACTACCAT TCCACACCGT CTTCCTTCAT GCCATGGTGC GGGACAAGGA 
AGGAAAGAAA ATGTCAAAAT CTCTTGGAAA TGTGATCGAT CCTCTGGAGG TCATCAACGG 
GTGCTCATTG GCCTCTCTGC AAGAGCGTCT GGAAGGAGGC AACCTTCCGG CGAAGGAAGT 
GGAACGATCG AAGAAGAATA ACGAGCTCGA GTTTCCTGAC GGTATTCCAG AATGCGGATC 
GGATGCACTT CGGTTCGGCC TTATGGCCTA TATGGTCCAG GGACGTGATA TCAATCTTGA 
CGTCAAACGT GTTGTTGGGT TCCGGCTGTT TTGCAACAAA CTTTGGAACG CCACACGTTT 
TGCACTTCAA TTTGTTGCGG ACTTTACGCC TACTCCGACT CTGTTGGACG ACCTAATGGC 
TAGCGGCAAA ATGGCGACGC GAGACAAATT TATGATATCT CGATTGATGA AAGCGGTGGA 
AGCCGTCAAC GATTTCTTCT CGAGCTACCG GTTTGGCGAT GCACAACAAG CGGCCTATGC 
TTTGTGGATT GAAGATCTTT GCAACACATA CCTGGAACTG ATCAAACCCG TCGTATACGA 
CATGAGTGTC AACAACATAG ACAATCGGTG GGCAGCACAA GCAACGCTTT GGATCGCAAT 
GGAAACAGGC CTTCGGTTAC TGCATCCAAT GATGCCATTT GTTTCTGAGG AGCTTTGGCA 
GCGACTTCCT GGACGTGGGA CGCTAGGCAA AACGGAACCT GAAACTATCA TGCTCGCCCC 
GTACCCCGAA ACTCACAACT CTTACAAAAA TGAGGCCGTG GAGCAATCTA TGATGAACAC 
AATGGCTGTG GTTAATGCCT GCAGATCACT TCGTCAGTCG TACAACATTG CCAACAAGGT 
ACAGACACAT TTCTTTGTGA ACGTATCTGG ACTCGCGCTA CATGCCGTTC TCGACCAACT 
GGATGACATC AAGACACTTG GAAAAGCTTC TGCCATTGAT ATTAATCTTT CCCCAGCAGA 
CACACCAGAA ACTGTCGGAA CTGCCATTGT CAATGATCAG CTGACTGTTC TGATTGACTT 
ACAGGGACTG GTTGACTACA AAGTTGAGAT TGGGCGTCTG CAAAAGAATC TAAGGTCTAC 
TCTACCAACA ATTTCGACTC TCGAAATGAA AATGGCTACT GATGGTTATA CAGAAAACGT 
TCCAAACGAT CTTCAAAAAG CGAATCTAGA GAAACTTGAT TCGCTTTTGA AAAAGAAGTG 
TGATCTCGAA GAGGCTATTG CAAACTTTGA ACGTCTGGCC TTATTGGATA AGAATTAA 

 

Protein sequence

MSEEPPVGVN PNAEDETPAP EGEKKLSKNQ LKKLAKGKDK KKKDKPQWNA PSKEKVKAPV 
ATTSFVNTTP KGEKKDLSAP MDAAYHPSAV EAAWQDWWEK CGYYSCDPKD AVDRPVDEKF 
VMVIPPPNVT GSLHLGHALT AAVEDTLTRW HRMKGHATLY VPGTDHAGIA TQSVVEKMLM 
KSEGKSRHDL GREEFVKKVW EWKKDYGSKI TNQLRSLGSS VDWSRERFTM DEMLSKAVVE 
AFNRFHEKGL LYRADRLGNW SCALKSAISD IEVDFIELEG RTFLDVKTHK GNPNDPNGRY 
EFGTLTSFAY PIEDSEEQIV VATTRLETML GDTAVAVHPD DPRYTHLHGK HLIHPFNGRR 
IPIVCDKELV DMSFGTGAVK ITPAHDPNDY ECGKRHELEF ITMLTADGSI NENGAPFTGM 
MRYDARIAVE DALKEKGLFK GKEPNKMRLG LCSRSGDILE PMITPQWYVN CDGMAKRATD 
AVRNKELTIL PEEQEKTWFH WLDNIKDWCV SRQLWWGHQI PAWFATKKGE SLEKNDMANN 
DRWVVARSAE EALEKAAKLL GCPAGDISIE RDEDVLDTWF SSGLFPFSVM GWPDDTSDLK 
AFYPTSLLET GLDILFFWVA RMVMMGLELT DTLPFHTVFL HAMVRDKEGK KMSKSLGNVI 
DPLEVINGCS LASLQERLEG GNLPAKEVER SKKNNELEFP DGIPECGSDA LRFGLMAYMV 
QGRDINLDVK RVVGFRLFCN KLWNATRFAL QFVADFTPTP TLLDDLMASG KMATRDKFMI 
SRLMKAVEAV NDFFSSYRFG DAQQAAYALW IEDLCNTYLE LIKPVVYDMS VNNIDNRWAA 
QATLWIAMET GLRLLHPMMP FVSEELWQRL PGRGTLGKTE PETIMLAPYP ETHNSYKNEA 
VEQSMMNTMA VVNACRSLRQ SYNIANKVQT HFFVNVSGLA LHAVLDQLDD IKTLGKASAI 
DINLSPADTP ETVGTAIVND QLTVLIDLQG LVDYKVEIGR LQKNLRSTLP TISTLEMKMA 
TDGYTENVPN DLQKANLEKL DSLLKKKCDL EEAIANFERL ALLDKN