Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43010 |
Symbol | |
ID | 7196820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1788513 |
End bp | 1789311 |
Gene Length | 799 bp |
Protein Length | 219 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177371 |
Protein GI | 219111239 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCAATCCAT CCCGTCACCA GAAGAGTTCT GGTGCAGCAT TCAAAATGTT GGATACTGTC TCTGCGTAAT CTGTATTAGT TAACCCAGGG AGTTCGGGAG TCGTCATTTT CCTTCCCTAT TGGCAAAAAT GGGGATTCCT GTTGCTCTTT ACGTTCCTAA TCTGCTTGGG TATGCCCGAA TAATGCTGGC CCTCGCCGGC CTTCACGCTT CTATTCAGCA TCCATGGACC GCATTTTCTC TCTGGATTTT ATCGGCTTCA TTGGACCTCA TCGATGGTAT CCTTGCTCGA GCGCTTAAGC AAACATCGAA ATTTGGAGTA CTTTTGGACA TAGGTGCTGA CAATATTTTA AGATCGTGTG TTTGGGTTGC GGCGGCCGTG TCAAACCCGG CCTATCTTAT TCCATCTACA ATTATTTTGT GCCTCGAGTG GTGTACCATG CTAGCTACAC AGCTACATGC CGAAGCTCAC AGATCACACT GGAAGAATGC CAGACAAAAA GATCCCATCT TTATTCAGGC ATTCTTCGCC AATAATTTTC GAAACCCGCT CGGGCTACTT GGAATTTACG GATTATTTGG AGGAAACATA CTGGCATACG CAAGCTCACA TACAGATTTA AGCGAAAAGC TCCCATGTTT CGGGTTTTTC AAGTACTTGG CTTTTGCCGG CCGCGGGATT GCTATGGGGA TCGAGCTCTG GATGTGTAGT GATTACTTGT CTTTGGTACT CCGACAAGAT GCGGGATTGG AAGAGGATAC TGGTCAGGGT CATAAAAAGG TCTCTTGAAG ATGTTCTTC
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Protein sequence | MGIPVALYVP NLLGYARIML ALAGLHASIQ HPWTAFSLWI LSASLDLIDG ILARALKQTS KFGVLLDIGA DNILRSCVWV AAAVSNPAYL IPSTIILCLE WCTMLATQLH AEAHRSHWKN ARQKDPIFIQ AFFANNFRNP LGLLGIYGLF GGNILAYASS HTDLSEKLPC FGFFKYLAFA GRGIAMGIEL WMCSDYLSLV LRQDAGLEED TGQGHKKVS
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