Gene PHATRDRAFT_42972 details

Gene Information

• Locus tag: PHATRDRAFT_42972
• ID: 7196207
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1664992
• End bp: 1665722
• Gene Length: 731 bp
• Protein Length: 182 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177342
• Protein GI: 219111181

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCCA TAAGTCTCGC AATTATCGGA AAGAACAACG AACCTCTTTT CATCAAAGAG 
TTTTTTGATG AGAGTAATCG CTGCTCGACC AATTTCCTCT ACGAGGAAGA GCTTTTCGGC 
TTACCACCAC CCAAGGATCG CCCGCCGCCA GCCTGTTCTC TGCGCCAGCA ATTCATTCTG 
CATTCTGCTT TAGATCGTTT CGAACAACTG GCCGGACCAT CTCCTGGCTA TGCGTGGCGA 
ACAATCAATG CTTCGGGGAC TGATGCAATG TTTGTGGGAC TGCTGTGTCC TGTTGACGAC 
CTCCGAGTGT ACGGTAAGAG TCATGACGTG TGGATTCCCG CCTCATTCAA TTCAAACGGT 
TACTTGTTCT CTAACAACAT CGACTGCTTT TCTGAAAAGG GTACATGACA ACAACGCAAA 
TAAAATTTAT TTTGTGTGTC GAAGATGACG CACTCCCGGA TGATCAACCA AGTGTCGACG 
AAATGATCAA ACGCTTGCTT TTCAAAATCC ACAGGCTTTA CGTTGAGCAA ACTCTGAACC 
CTTTCAGTTC CATGGGTGCT CCAATCTCGT CTCCTCGATT TGAATCGCAA TTGAAATCCA 
CGGTAACGGC ATACAACCAT GCCGTCGCCC GCTAAAGCAT ACGCCTCTGG GTCAGAAGCT 
GTATTGTTTA ACTGTAAGTT GCGGAGACGA TCGTTCTTCG ATACTACCAG GACAAACACA 
CGTATCCTAT T 

 

Protein sequence

MAAISLAIIG KNNEPLFIKE FFDESNRCST NFLYEEELFG LPPPKDRPPP ACSLRQQFIL 
HSALDRFEQL AGPSPGYAWR TINASGTDAM FVGLLCPVDD LRVYGYMTTT QIKFILCVED 
DALPDDQPSV DEMIKRLLFK IHRLYVEQTL NPFSSMGAPI SSPRFESQLK STVTAYNHAV 
AR