Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42929 |
Symbol | |
ID | 7196185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1541725 |
End bp | 1542525 |
Gene Length | 801 bp |
Protein Length | 238 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177317 |
Protein GI | 219111131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.149568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAT CGTCTGGCGA AATTGGTAGT GAAGAAGCCA TCTCTCCAGA AGCATCCAAG CGCATCTGCG ACCATATGAA CGACGATCAT ATGGTTTCCG TTTACGCCAT GGCCAAGGAG TTGATTGAAT ATAAACGGGA TTGGAAATTG ACAGGCGCCA AGCTCAAGAG AGTGACGGCC TATGGATGCG AAATTCAGGC TATAACATGC TCCGGCGAAC TCTGTGAAAT GCTACCCGTT GTTTACCCAT TTCGACCGGC TCTCAAAACT GCGGCTCAAT CTCGGAAACA ATTGGTCAAG ATTCACCAAA AAGTGTGCTC TCCAAAACTA GAGTGGCTAC TGGACCCATT GCCGCTGGGT GTGATCGGCA TTAGTATTTT TCTAGCGTAC GGAACGCTCA TTCTTGGAAT TCCGGAGCTG AAAGCTTCCA TTGAAAACGA CGAATCTATG AATTCCATGA TATGTTCGTT GTTCGGTTCA CCGCACATTT TCAGTCAGAT GGTCAAGGCC GCCTTTTGGT TTACGGTTGT GATTCACAGT GCTGAAGCTG ACTATGCAAT CTACAAATGT CGCACCACAT TGAAGTTGGA TTGGATAACA TCGATGTTTT GGTTTGCAAC AACCTGTCTT GTGGGGTATC CCGTTTTAGG GCATCTGATT CAGCTGATCC AAATTCACGA CAAGAGCAAG GCAGCTCAAA AGGCTAAGCT GAAGTAGTCG AACTGGCATA GTACGAACTT TTCAATAATG AAAAGCCATT AATTTAGTTC AAGTAACGTT TTAAACCTAT TTTTTGGTTT T
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Protein sequence | MAKSSGEIGS EEAISPEASK RICDHMNDDH MVSVYAMAKE LIEYKRDWKL TGAKLKRVTA YGCEIQAITC SGELCEMLPV VYPFRPALKT AAQSRKQLVK IHQKVCSPKL EWLLDPLPLG VIGISIFLAY GTLILGIPEL KASIENDESM NSMICSLFGS PHIFSQMVKA AFWFTVVIHS AEADYAIYKC RTTLKLDWIT SMFWFATTCL VGYPVLGHLI QLIQIHDKSK AAQKAKLK
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