Gene PHATRDRAFT_42929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42929 
Symbol 
ID7196185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1541725 
End bp1542525 
Gene Length801 bp 
Protein Length238 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177317 
Protein GI219111131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.149568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAT CGTCTGGCGA AATTGGTAGT GAAGAAGCCA TCTCTCCAGA AGCATCCAAG 
CGCATCTGCG ACCATATGAA CGACGATCAT ATGGTTTCCG TTTACGCCAT GGCCAAGGAG
TTGATTGAAT ATAAACGGGA TTGGAAATTG ACAGGCGCCA AGCTCAAGAG AGTGACGGCC
TATGGATGCG AAATTCAGGC TATAACATGC TCCGGCGAAC TCTGTGAAAT GCTACCCGTT
GTTTACCCAT TTCGACCGGC TCTCAAAACT GCGGCTCAAT CTCGGAAACA ATTGGTCAAG
ATTCACCAAA AAGTGTGCTC TCCAAAACTA GAGTGGCTAC TGGACCCATT GCCGCTGGGT
GTGATCGGCA TTAGTATTTT TCTAGCGTAC GGAACGCTCA TTCTTGGAAT TCCGGAGCTG
AAAGCTTCCA TTGAAAACGA CGAATCTATG AATTCCATGA TATGTTCGTT GTTCGGTTCA
CCGCACATTT TCAGTCAGAT GGTCAAGGCC GCCTTTTGGT TTACGGTTGT GATTCACAGT
GCTGAAGCTG ACTATGCAAT CTACAAATGT CGCACCACAT TGAAGTTGGA TTGGATAACA
TCGATGTTTT GGTTTGCAAC AACCTGTCTT GTGGGGTATC CCGTTTTAGG GCATCTGATT
CAGCTGATCC AAATTCACGA CAAGAGCAAG GCAGCTCAAA AGGCTAAGCT GAAGTAGTCG
AACTGGCATA GTACGAACTT TTCAATAATG AAAAGCCATT AATTTAGTTC AAGTAACGTT
TTAAACCTAT TTTTTGGTTT T
 
Protein sequence
MAKSSGEIGS EEAISPEASK RICDHMNDDH MVSVYAMAKE LIEYKRDWKL TGAKLKRVTA 
YGCEIQAITC SGELCEMLPV VYPFRPALKT AAQSRKQLVK IHQKVCSPKL EWLLDPLPLG
VIGISIFLAY GTLILGIPEL KASIENDESM NSMICSLFGS PHIFSQMVKA AFWFTVVIHS
AEADYAIYKC RTTLKLDWIT SMFWFATTCL VGYPVLGHLI QLIQIHDKSK AAQKAKLK