| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42927 |
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| Symbol | |
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| ID | 7196184 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1538671 |
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| End bp | 1539925 |
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| Gene Length | 1255 bp |
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| Protein Length | 383 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177316 |
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| Protein GI | 219111129 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00363535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATGA ACACGAAACT AGCACCAAAT GTTGTCCACT GCATGCTTTT TGGCATATCA
AGCTTTTCCC TGATAACGAC TACGAAAGGA TGGCAAGGAG GATTTTCCAT TCAAAGGCCA
CGGAAATTCT TGATCGTCCC CAAGACGTTG CCGCAGAAGA CCAGTCCTCG GTTTCTCCAA
ACCGATGTAG TGGTGCAGCA AAGCGCTCGA GACATCGAAG ATCCCATATC AAATATACAT
AATGGAAAGC GCCTATTGCG TTCGGAAAAA ATTATGTCCA TGTTTACGAA GAATGGAAAA
TCCGAAAGAG AAGCAGTGGT TCTGCAACAA CTACGACAAG AGAATGACCT GCTGCGGGTT
GCTCTACAAC GAGCCGAAGC CGAGAACGAG CGGCTGCATA GACACTACGA TAATGGAAAT
CGTATTATTT TGGAAAGCTT TGAAGGAGAA GGAAGATTTC GAAGAGCCGA TGACGGAGTA
ATGTCGGACA TTCCTATGAC ACTCACAGGA GAAGAAATGC TCACGGAAGA AGCTTCACAG
TGGTGTGATG AATTGGAAGA TGATGCCTGT CCGCTGGAAC CGACCATTTC GTTTGGAGAG
GCACTACGAG ATCGAGCTTA CTGGTTGGTG GGGCTTTTGA TCATGCAATC ATGCAGCGGC
ATTATTCTGG CACGGAATGA GGTTCTACTG GCCAATCACC CTGTCAGTGA GTAATTTATG
TTTGCTGCTG ATTTGATCAA CAGACCCCTC ATTGTCGTGC GAGCTGTTCA TTTATTCTGT
CCTAACAGTA GAGTGTTTTC ATTTTTTAGT TATATACTTC TTAACCATGC TGGTGGGTGC
CGGCGGAAAC GCCGGCAACC AAGCCTCGGT CCGAGTGATA CGGGGGCTTG CTCTCGGTAC
ACTGAACGAA AAGACACAGG GCCAGTTTTT GTCACGAGAA CTCAAAATGG CGTGCGCACT
TAGTGCTATT CTCTCGGTAA CTGGGTTTGT CCGAGCCATT GCGTTTCGGA CGCCCTTCTC
CGAAGCGATC GCCGTTACAA GCGCGTTAGC ATTGATTGTT TTCTCCAGTG TGTGTCTAGG
GGCAATTCTT CCACTGGGAC TGAAAAGGTT AGGCGTCGAT CCCGCGCACA GCTCCACGAC
TATTCAAGTT ATCATGGACA TTCTCGGCGT CGTCATTGCT GTAGCTGTTT CCAGCATTTT
GCTCGACAGT CCGCTAGGGA TTCTTCTCAT TTCTAGACTT GGTGGGGGTT CCTGA
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| Protein sequence | MVMNTKLAPN VVHCMLFGIS SFSLITTTKG WQGGFSIQRP RKFLIVPKTL PQKTSPRFLQ
TDVVVQQSAR DIEDPISNIH NGKRLLRSEK IMSMFTKNGK SEREAVVLQQ LRQENDLLRV
ALQRAEAENE RLHRHYDNGN RIILESFEGE GRFRRADDGV MSDIPMTLTG EEMLTEEASQ
WCDELEDDAC PLEPTISFGE ALRDRAYWLV GLLIMQSCSG IILARNEVLL ANHPVIIYFL
TMLVGAGGNA GNQASVRVIR GLALGTLNEK TQGQFLSREL KMACALSAIL SVTGFVRAIA
FRTPFSEAIA VTSALALIVF SSVCLGAILP LGLKRLGVDP AHSSTTIQVI MDILGVVIAV
AVSSILLDSP LGILLISRLG GGS
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