Gene PHATRDRAFT_42880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42880 
Symbol 
ID7196460 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1402788 
End bp1403640 
Gene Length853 bp 
Protein Length191 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177286 
Protein GI219111069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.401564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCAC CCCGGAAAAA GCTCTGGAGT ACCCCCGATA CGGTTATCGC CAAGGCCATT 
GCCTGGGTTC CCCTGCAGCC TGGAGACCTC GTCGGCGATG TCGGATGTGG AGACGTGAGT
GAATGATGAA CTATTACTGT TTGTGATGGT TATGATCTTC GTCCTTTGTC TCATTGAAAA
GTTGGCTTCA TCTGAAACAA ACACACAGGG TCGCGTGTTG CTTCAGTGGG CGACCGCTTT
CAGTCAAACG AACGGGTCGC AATTGAGTTC GTGGGTTTCT TCCCGCCCCA ACGAATCTAT
CGTCTCCTTT ATCGGAATAG ATGTAGATTA CGAACGCGTA GAATGTGCGA ACGCCGCCTT
GCGTGTAGCC CGGGAGCAGG GACACATCCA TCCAGCCGTG CAAGTCTCGT TTCATTGCAC
CAACGCACTC GACGCCACGG ATCTCTACGC GAACGTGACC GTCTTCTTTT TATACCTGAT
TCCCCGGGGT CTGCGGATCC TTCACCCTCA TTTACCACGG ACCGCTCGCT GTATTCTCAC
CTACATGTCG CCCTTGCCCG ACCGCACCCC GATCCAACGA GAACTGGTAC CGGTACCTCA
TCAACCTGGA GCGGCCTGGC CTCTACACCT GTACAGCAAT CGGATCGACA ATGTTGCTAG
AGCAATCTAG ACACCTCGTA ATTTATCCTA TTGGAATCGT CCAGTGCAGA AGTACTTTGT
GTGCAACTTT GATTCCCTTC CGATTGGACG CAATCGTAGC ACGTCGATTG TACGCATCAC
CTGTCGAGCG TTGTAGCCGG CGCACATAGC AACTGTGGAG TACATTTGTA AGACTAAAAG
ACTACCTCAA AAT
 
Protein sequence
MLAPRKKLWS TPDTVIAKAI AWVPLQPGDL VGDVGCGDGR VLLQWATAFS QTNGSQLSSW 
VSSRPNESIV SFIGIDVDYE RVECANAALR VAREQGHIHP AVQVSFHCTN ALDATDLYAN
VTVFFLYLIP RGLRILHPHL PRTARCILTY MSPLPDRTPI QRELVPVPHQ PGAAWPLHLY
SNRIDNVARA I