Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42880 |
Symbol | |
ID | 7196460 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1402788 |
End bp | 1403640 |
Gene Length | 853 bp |
Protein Length | 191 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177286 |
Protein GI | 219111069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.401564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCAC CCCGGAAAAA GCTCTGGAGT ACCCCCGATA CGGTTATCGC CAAGGCCATT GCCTGGGTTC CCCTGCAGCC TGGAGACCTC GTCGGCGATG TCGGATGTGG AGACGTGAGT GAATGATGAA CTATTACTGT TTGTGATGGT TATGATCTTC GTCCTTTGTC TCATTGAAAA GTTGGCTTCA TCTGAAACAA ACACACAGGG TCGCGTGTTG CTTCAGTGGG CGACCGCTTT CAGTCAAACG AACGGGTCGC AATTGAGTTC GTGGGTTTCT TCCCGCCCCA ACGAATCTAT CGTCTCCTTT ATCGGAATAG ATGTAGATTA CGAACGCGTA GAATGTGCGA ACGCCGCCTT GCGTGTAGCC CGGGAGCAGG GACACATCCA TCCAGCCGTG CAAGTCTCGT TTCATTGCAC CAACGCACTC GACGCCACGG ATCTCTACGC GAACGTGACC GTCTTCTTTT TATACCTGAT TCCCCGGGGT CTGCGGATCC TTCACCCTCA TTTACCACGG ACCGCTCGCT GTATTCTCAC CTACATGTCG CCCTTGCCCG ACCGCACCCC GATCCAACGA GAACTGGTAC CGGTACCTCA TCAACCTGGA GCGGCCTGGC CTCTACACCT GTACAGCAAT CGGATCGACA ATGTTGCTAG AGCAATCTAG ACACCTCGTA ATTTATCCTA TTGGAATCGT CCAGTGCAGA AGTACTTTGT GTGCAACTTT GATTCCCTTC CGATTGGACG CAATCGTAGC ACGTCGATTG TACGCATCAC CTGTCGAGCG TTGTAGCCGG CGCACATAGC AACTGTGGAG TACATTTGTA AGACTAAAAG ACTACCTCAA AAT
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Protein sequence | MLAPRKKLWS TPDTVIAKAI AWVPLQPGDL VGDVGCGDGR VLLQWATAFS QTNGSQLSSW VSSRPNESIV SFIGIDVDYE RVECANAALR VAREQGHIHP AVQVSFHCTN ALDATDLYAN VTVFFLYLIP RGLRILHPHL PRTARCILTY MSPLPDRTPI QRELVPVPHQ PGAAWPLHLY SNRIDNVARA I
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