Gene PHATRDRAFT_42870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42870 
Symbol 
ID7196516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp1370753 
End bp1371484 
Gene Length732 bp 
Protein Length243 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177279 
Protein GI219111055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.442605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCTC GTGACACGGA TCCTTTAGCG CTCATCGCTT CCAATTCCCA TCAGGAAGAG 
GAAAGCACCC CTGTCTTTTC TCCTGAAAAG CTGTGCTCGT CCCAACCTCC TGGGTATGTT 
GGAATTATGA GTGTTCGTTC CCAACTTGAA AGCGTCAAAC TTGATACCAA CTGCTCGCAT 
TCCCGACGAA TCATGAGGCA GGAAGATCAC GACCTTGACC TAGAGTCGTG CCATGTCAGT 
TTTGGCAACG TTCAGATCCG AGAATATCCT ATTGTTCTTG GCGACAACCC TGGAGGATCC 
TCCGGACCAC CCTTGTCCAT TGAATGGACA CACCAATCAG AATCCAGTGT CCCACTGGAT 
GCATATGAGC AAGATCGACC GAACCGCCGA GATCGTGCAG AAATGTGCAT GCCCGCATTT 
TTGCGCGTCA AAATGTTACA AGAGGCCGGA TACAGTCGAG CGGAAATCGT GGCGTTGCAA 
AAACCCGTCA ACATCACCCG AGTGCAACGC CGCAGAACAA ACGCCACGCT CAATTTACAA 
ACTTTGCACG AAATTACTGA ACGAACTAGG CGCAAAACGC TAAACCTTCT ATCTTTGGGA 
ACGCGAAAAC GGAAGGAAAA GCATTTTTTG GAACCTTTTA CGAAAGCCAA GGCGGAGAGT 
GTTAAGCCAC ACTTGTCGCG AACGTCGATT CTCACTGAAG AATCTTTTTG TGAACTCGAA 
CGACCGCTCT AA
 
Protein sequence
MVARDTDPLA LIASNSHQEE ESTPVFSPEK LCSSQPPGYV GIMSVRSQLE SVKLDTNCSH 
SRRIMRQEDH DLDLESCHVS FGNVQIREYP IVLGDNPGGS SGPPLSIEWT HQSESSVPLD 
AYEQDRPNRR DRAEMCMPAF LRVKMLQEAG YSRAEIVALQ KPVNITRVQR RRTNATLNLQ 
TLHEITERTR RKTLNLLSLG TRKRKEKHFL EPFTKAKAES VKPHLSRTSI LTEESFCELE 
RPL