| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42850 |
|---|
| Symbol | |
|---|
| ID | 7196502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1309766 |
|---|
| End bp | 1311678 |
|---|
| Gene Length | 1913 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176762 |
|---|
| Protein GI | 219110020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0845569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCGTTTGCGG CGTTGCTGTC AAAAAACGAA GGAAAATAGG AACAGTACAT CCATACAATC
ATACGTCTTT TTATCGACAA AAGAGCAGCA AGCATGGTTC TATCAGACAA GATTTTATTT
CCACCCTGCA CGTCGGAGAA GTGTACTGTT GACGAAGAAG AAAAGCGGAA GGTTGCAGCC
GTACAGCCTT GTGCGATGAC GGAAAAGTGT GTGAGCGCGT GCTCCGCATA TGGTCGTGTT
TGCCCTTGCG CGGCACGAAT CGCCGGTCAC GCAGCATGTG AGGCAATGCA AGAATTGATG
AAGGGTAGCA AAATATTTAA AGAAGACGAA CGGACCTTCG TCCACCTTGA TCCGAACGAT
ATCACTATTT CAGAAAAATT GGGAGAAGGT GGATTCAGTA ATGTAAATCG CTGTGTCGTG
CAAGCTGGAG ACGAGGCTGG TCAAGAATTC GCTGTAAAGT ATTTGAAGCG TAAGGCTATG
GTCGATATTC ACCAATTCAA GCATGGCGCA GCTGACCTCG CCATCGAAGC TTTCTTTTTG
CATTCTTTGG ACCATCCCAA CATTGTCAAG CTGCATGGTG TAAGCGCCGG TAAGATTGAG
AACAACGTTG CATCCGGTGA AGAATGTGGA TTCTTTATTG TCGTCGATCG ACTATTCGAT
ACACTAGAAA GTAGGATTGA AACCTTTCGG AAAGAACAGG AAGATTATTC GACAAATCCT
CTCATACGGC GAGGGGGTGC CTATCGCGAA AAGCAGAAAA GCAACTTGAT GGAGAGATGC
AGAATAGCTC TGGAAATTGC GAGTGCAATT GAGTATCTGC ACTCAAAACA AATTATTTTC
AGAGATTTAA AGCCTGATAA CATCGGGTTT GACAAACACG GCACTTTGAA GATATTTGAT
TTTGGTTTAG CCAAGGAACT GAAACCTGAA CTTTGTAACC AAGATGGGCG CTATCGGCTA
ACGGGAAACA CAGGGAGCCG CCGTTATATG GCACCTGAAG TTGCTAAAGA CTGTCCTTAC
GATATGACCG TGGACTCGTA TTCTTTTGGT ATCCTTTTGT GGGAGTTGTG CTCTGCCGAG
AAGCCTTTCT ATGGATACAG CAGTGGCAAA CATATGCAGC AAGTCGTACT TGGAGGCGAA
CGACCGAAAA TGGACTCTCA ACATACCGTG TACTGGCCAG AAAATTTGCA ATGGATCATG
ACACGGTGTT GGTCGCCTTT CCCTTCTCTG AGGCCATCTT TTTCCACAAT TTCGGAGATT
TTGATGGATG TTCTAGCCAA GAAGGAATCC GTTCCACATC GGCTTTTAAT GCATACCATT
AACGAAGAGA AGCATCCCCT CGAAGGCCCA GTTGGTGGCT TTGTATCCTT GTTTTCTCGA
AAGGCCAACA GACGAAGTAC CACAGCTGGT ACGATTGACG ACAAGTCGCA GGATTCCGAA
GCAAGCGCGT ATAGGAGAAA GTCATGGGGA TTCGGAATGC GACGATAGAT TAATGTTCCA
CTTTTGGAAG GCCGCAACAG AGTATAAAAT CGAAAACTAC AGTTACAGAT TCCCAGTGTC
AGCAATAACA GGAAGTTAGA GACGTATGTT GTGGCCTACT CTACCATTGC CATATCGGTG
GACCTACAAG AAAGAGGCAG CTGGAACTGC TGTCAAGTTC GAGATTCGGC ATGAAACCAA
CCCACCCACC AGCCATCCGA GTGTTTACAG AATGCGAAAT AGTAGGGGCT TGGATGAACG
CTTACTGCCG AGCTCTATCC AAGCATGAGA AGCAAGCTGC TGCTTGACAG ACGGTGACTT
TTCATGCGTC TTCCTCTGTT GTGACGATTA ATTGCTCAGT AAACATTTAG AATGCAGTCG
TTCTATATTG ACTGTGAGTT GTGATCATTG TTAGCTAGTA GTACGCCTTG TCG
|
|---|
| Protein sequence | MVLSDKILFP PCTSEKCTVD EEEKRKVAAV QPCAMTEKCV SACSAYGRVC PCAARIAGHA
ACEAMQELMK GSKIFKEDER TFVHLDPNDI TISEKLGEGG FSNVNRCVVQ AGDEAGQEFA
VKYLKRKAMV DIHQFKHGAA DLAIEAFFLH SLDHPNIVKL HGVSAGKIEN NVASGEECGF
FIVVDRLFDT LESRIETFRK EQEDYSTNPL IRRGGAYREK QKSNLMERCR IALEIASAIE
YLHSKQIIFR DLKPDNIGFD KHGTLKIFDF GLAKELKPEL CNQDGRYRLT GNTGSRRYMA
PEVAKDCPYD MTVDSYSFGI LLWELCSAEK PFYGYSSGKH MQQVVLGGER PKMDSQHTVY
WPENLQWIMT RCWSPFPSLR PSFSTISEIL MDVLAKKESV PHRLLMHTIN EEKHPLEGPV
GGFVSLFSRK ANRRSTTAGT IDDKSQDSEA SAYRRKSWGF GMRR
|
|---|
| |