Gene PHATRDRAFT_42834 details

Gene Information

• Locus tag: PHATRDRAFT_42834
• ID: 7196492
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1271538
• End bp: 1273806
• Gene Length: 2269 bp
• Protein Length: 639 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177255
• Protein GI: 219111007

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTTGGTAG CCAGCTACCT CAATATTTAC AGCCGCCACC AACCATCCAT CTTCGTTTGC 
GTAAAGACAT TGGATAAAGA GACTTGGCCG CGGTAGAGAA CCCGTGATTG CAGTTTCATT 
AAACCGGCAA AAACAATCTG AGGTCCAGCA TTGTACTTTC ATCATCGGAA ATGGATGACG 
AAAGAAGCAA CGATGAAGAC AATGGAGGCG AAGTTTCGGA CCAGGCCGCT GCCGCTGCCC 
CTCCCGATAT ACTTCCTGTT GAGGAAGAAG ATCACGAAAG AAATCCGCCA CCGCCTGTCG 
TCCCGGTGCA TGCCGAGGCT GTTAGCATCC TACAGCTGCA TCGAGCACCA CCTAACGCGA 
ACTTTCACGG GAGCGCTACC TCGTCATCCT CGTGTGCAGT CTCAGCTTCC AACCAATCTC 
TCCTGCGTCA ACAAGCTCAC TCACCAGTGT CCAATGCTAC GCACGGTTTA GAGGTCTCTG 
CGCGATCTTT CCAGGGAGGC TATCGGAGGA GTTACGAAGC TCCATTCCAA CAGCTAGCTT 
TCTCGGACAC CAGCCCGGAA CTAGACATGG AAGATCCAAA TGCATCAGAG CAATCTAGTG 
GATGGAGTGA TGTGGCGCAT TCCCAAGATC ATGGCAATGG GGGAGTACCA CCATCGCCTC 
GATCGTTGCA TGCAGGGGCT TTATTGAACG GAAACTTTTA CACTTTTGGT GGATACGACG 
GCAATCAACG AGTTAATACA TTTCATGCGT TTTCATTTGC GGAAAAACGT TGGTCACCCG 
TTTTTCCCTC AGCGAATTCG TCACCACCTC CGACTCCCAG AGATAGGCAC GTCGCTGTGG 
CGTTTGGAAA TGCATTTTAT GTGCACGGGG GTTTTGATGG CACCTCCCGA GTAGCCGACT 
TTTGGGCTTT TGACTTTTCC ACAATGAGTT GGCGCGAGAT TGTAGCTCTC CAGGGTAGGC 
ATCCTTCGCC TCGCCACTCT CACGCAGCAG TTGTGCACGG ACACTCGATG TATATCTTTG 
GTGGATATGA TGGATCCTAC AAATCAGATT TACACGAGTT CGACTTTACT ACGTCAAGGT 
GGAACGCAGT ACCGGCTGTC GGGCGACGTC CGCGAGCACG ATATCGAGCA ACCTGTGTTG 
TACACAAGAA CTCCATGATC CTATACGGCG GACACGATGG AACTCGGCAT TTGTCCGACA 
CTCATGTGTT TGATATCGAC ACCAAAACGT GGGCCATCCT ATTGACTGAA GGGGCTCCAC 
CTGTACCACG TGATTCGCAT GTTAGCGTGA TTCATATGAA TAGTATGTAT GTCTTCGGGG 
GGAGTACTGG AAGTGCGATG AATGATCTAC ATGAACTCCA GCTACCTTCA AGTTCTTCGA 
TGTCTGCGAA ATGGCGAAGC ATCAATGCTT CTCATGCTGA ACAACCGCGC CACCGTTTTT 
GTCACGTAGC CGTCGTCCAC AGCGATGCCA TGTTTGTCTT TGGTGGATAC GATGGCTCAG 
ACAGGCTCAA CGACTTTATA CGGTTCGATT TTACGGTGTA CGACTTGAGC TTTGAGGTCC 
CACAGTCCAC TTTGATTGCT GATTTCCGAT CGATGATCAA TGACGTGACA CTGTCTGACG 
TTTCCTTTAT TGTTGAAGGA CGGGACTCTC CAATCTACGC CCACAAGCTC ATGCTGGTCC 
GTTGCCCGTA CTTTGAGTCA CTTTTTCTTG GCAGCATGAG AGAATCCCGT CAAGCCACAA 
TTTATATTGA ACAAGTGTCG TACCCTATCT TTTTGGCCAC TTTGGAATAT TTGTACACTG 
ACCATGTATC CATCTCCTTA AAAAATGCCA TGGAACTGTT TGAAGCGGCC GACCTTTTTT 
GCATACCGCG GCTTAAGACA ATGTGTGAAA AACGGATGCT TCAATCAATA ACTGTAGAGA 
ACGCAGCAGG TATCTTTCTC GCTGCCGACA TGCATTCTGC TTCTGCTCTC CGTCAGAAGG 
TGAAAAAGTT CATTCTGAGT AACTTTGAGG AGGTGAGCAA GAGCAGCTGT TTCGAAGAAA 
TGGGACGCAG CAACATTGAA CTTGTCTTTG AACTATTGCA AAGCCGATAA ATCAAGTGAC 
GGCCTTCTGA TTGCTTACGG TGCAATGGAG GATGATCACA AATGCTATTC ACAGTGAATC 
TCGAGTGCAG TATATAGGTT GAGGTAAAGG GCCTTTAATT CGCTCATTTG GGTGACGTGA 
ACAGATAGTT TGTATCAACA AAAACTGGAC ACGGAAGATG TTTTTATTT 

 

Protein sequence

MDDERSNDED NGGEVSDQAA AAAPPDILPV EEEDHERNPP PPVVPVHAEA VSILQLHRAP 
PNANFHGSAT SSSSCAVSAS NQSLLRQQAH SPVSNATHGL EVSARSFQGG YRRSYEAPFQ 
QLAFSDTSPE LDMEDPNASE QSSGWSDVAH SQDHGNGGVP PSPRSLHAGA LLNGNFYTFG 
GYDGNQRVNT FHAFSFAEKR WSPVFPSANS SPPPTPRDRH VAVAFGNAFY VHGGFDGTSR 
VADFWAFDFS TMSWREIVAL QGRHPSPRHS HAAVVHGHSM YIFGGYDGSY KSDLHEFDFT 
TSRWNAVPAV GRRPRARYRA TCVVHKNSMI LYGGHDGTRH LSDTHVFDID TKTWAILLTE 
GAPPVPRDSH VSVIHMNSMY VFGGSTGSAM NDLHELQLPS SSSMSAKWRS INASHAEQPR 
HRFCHVAVVH SDAMFVFGGY DGSDRLNDFI RFDFTVYDLS FEVPQSTLIA DFRSMINDVT 
LSDVSFIVEG RDSPIYAHKL MLVRCPYFES LFLGSMRESR QATIYIEQVS YPIFLATLEY 
LYTDHVSISL KNAMELFEAA DLFCIPRLKT MCEKRMLQSI TVENAAGIFL AADMHSASAL 
RQKVKKFILS NFEEVSKSSC FEEMGRSNIE LVFELLQSR