Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42825 |
Symbol | |
ID | 7196485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1248428 |
End bp | 1249243 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177248 |
Protein GI | 219110993 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.66909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGTC CGAGGAAGGT CACTCCCGCT GTTCCGGCTC CTGCTGCAGC GACGGACTCA CCGGCTGATG CCACGTCCGC ATCCGAAGAT GAGGAGTTCG GAGGATTCGA CTCCTCCGAC GGTGAGGAGC CTTTGGGCAC CGCACCGCCA TTGCCGGCAT CTTTGGATGA TGAAGGTGAT GGCAAAAAGA CTGCAAAGCC TTTGGCTCTC AGCAAGAATA TGTCTGACAA AGTCAGCGTG ATCAAGAAAA GCGTCATCAA CCCAGAGCCT CACTTGTCTA AAGACAGTGA CGGTCTCGAC CCCATTCCTT GGCAAGACCG TGTCGAACAA AAGGCCTTGA TGGTTGTCCT CCGTGATGTC ATCTGTTTTC CATTGTCAGT TGCAGCTGCA ATATTAAACA ATGGCATTAA ACCATCTGAT GATTTCCGTC TTCTCACAAA GGAGGACATC AATGATCTCT GCATGCGGCT CAAAGTGGGC TCCATGCATA CCAAGCAAAT ACTTGTCTTC GCAAAATGGA TGCATCACAC ACCCAACTCA GTTGATGTTG CCAAAGAGTT CACAGCTTCC GTGCTACGCT TTGAGATGAT GACTAGAGCT GCGGCATTGT ATGATAATGT GACTACAACG GCTGCAAAGG CCGAAAAATC GGCTACTAGC CTCTTGCCTG AACCGTTTGA CGGTTTGCAG AAAAAGTGGC TCACTTTTTG TTATGGTTTT GAAGCGTGGG CAGGCGCAAG TGGGTCCACT TTTACGTGCA TCACGCATCA TTTGGATTGG TATTTGAAAG CCAACCCAAC CTATTACGTA GTATAA
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Protein sequence | MRRPRKVTPA VPAPAAATDS PADATSASED EEFGGFDSSD GEEPLGTAPP LPASLDDEGD GKKTAKPLAL SKNMSDKVSV IKKSVINPEP HLSKDSDGLD PIPWQDRVEQ KALMVVLRDV ICFPLSVAAA ILNNGIKPSD DFRLLTKEDI NDLCMRLKVG SMHTKQILVF AKWMHHTPNS VDVAKEFTAS VLRFEMMTRA AALYDNVTTT AAKAEKSATS LLPEPFDGLQ KKWLTFCYGF EAWAGASGST FTCITHHLDW YLKANPTYYV V
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