| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42824 |
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| Symbol | |
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| ID | 7196428 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1241180 |
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| End bp | 1243129 |
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| Gene Length | 1950 bp |
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| Protein Length | 460 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177246 |
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| Protein GI | 219110989 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.138741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCACAGCGC TTGTTCTACT AGTAGAAATA TATTGGCTTA CCCGCAGTTT CTGACAGGCC
GATACAAACT GTTTCGCGAA AAGCTTGAGA CGAGCACCGT AAAGTAACTC ATCAGCAGTC
ATGGCATCTG TTTCCGGACC TTCTGTTTCT GGAAAGCTTA CCTTCCCTGG ACCGATAGGG
GCGAAGCGTC GGCGAATGCG AAGTGGAGGT AATGCATCGA CAGTAACGAA CAACTCTCCA
GGGAAAACCG ACGGCTCGGA AAGCGAGCCT AAAACTTCGG GTAAATGTAA AGGGGGTACT
ACGATTCCAA TTTTTCTGAA AAGTAAGTAT CACGTGGCAA CCAAAAAATA TGATTGTATT
CCGGCCAAGT ACGCTTCGCT CGCGGTTTTG TCCATGCAAC GAATGTGAAG TTTTGAATGA
AATTCCATAT TACTTTTTAG ATTTTACCCG TGATTCGCTA CTCTGATTGT TACCAACCAT
TCTAACGCAT CTTTCTTTTC CAGAGACGTA CAAGATGATC GACAGTTGCG ATCCATCGAT
TGCGTCATGG TGAGTTCCAC TCGTAATTTC TTGTCTGTGC TCTGAGATAC AAATTAAGGT
TTTTGTTCGA TTGTGTTCCA CGCATTGTCT ATCTAGTACG ATAACCTGTT GATTCTCTCG
TTAAGGCAAA TGGTGAAGTT AGCCTTAGTG TACTTTCAAA TCCGCGAAAT TTTTGATCGG
GAAAAATCTG TCTTGACCTC ACCATTTTAT AATTTGTACT TTGATCCATT AGGACAGAGG
AGGGCGATAT GTTTATTGTT AAGGATCCTG ATGTTTTCGC AACGCAAGTG ATCCCGCAAT
ACTTTGACCA CAACAAATTT TCAAGTTTTG CTCGCCAGCT CAACTTTTAT GGGTTCCGCA
AAATGCAATC GAAACCAATC AGAAACAGCG ATTTTGACAC AGGTACCGCT AAGCACGTCA
CTTTTTATAA CGAAAACTTT AAGCGTGGTC GATGTGATCT GCTGAAGAAG ATTCAGCGCT
CGACTCGTGG AGGGGGGAAC ACGACGGGGC AAGACAGTCA TCGTGATGTC CAAAATCTTC
GTGATCAAGT TGCAATGCTC GAACAAAAGA TGGACGAAAT GAGCAGTCAG GTAGAAGATC
GCGTACGTCG CCTCGAACTG GAAATGTTGG CTCGCCTGGA GCAGATGATG CTTGCTATGC
AGCAGCAACA GACCACACAG TTGCACCTTC AGACTGCGAC TTCAGTTGGT TCAAACAGCG
GATCTGGTAG TTCCAACGGT ACTGGCAATC ATATGCCTGC GCCTTCCAGC AATCAATTGA
GCTGGGATAA TAACGGGCTA TCCTTTCCTC GCGGAAACTC TATCAACTCC AATGTGAGCT
CAGTAACCTT CCAGCAACCG CGGCAACAGC AGCAGCCACT CCAACAAATG ATTCATCAGT
CACATCAGTT AAACCAGTTG GACAACACCG GAATGGCTCC TCCGACCTTA CCGCCTCATC
CTAAGCAGAA GCAACTCCCA ATGAATGGAT TTCCTGGGAA CATGGCCACT CCTCCGGAAC
GAATGAATTC TCTACGTGGA ATTTCCACCT TGTCGCGTGG TCTTTCCGGA TTGTCGCGTG
GTGCGTCGAT TGAATCTAGT GCTTCTGCTG TATTGATGCG CAACTCTTGG GAGGATAAGT
TTTTTTCGAT GCTCATGCTA GATAGCGAGC AAAATGGGAG TAGTTCGAAC CCTCACGACT
CTAACGTGAT GCCAACTCCT CTTGCTCCCG GTATTTCGTC TAACGCAAAT GCACAAGCAC
CTGTCACTGT TTCAGATAGA TCGGCTGATA TCAATGGACA GCTCTCGGCG CACCACGAGA
ACAACGACGA TGATCTTAGT TCTGTATCGA CTTCAGACAT GCCATGAGGG GCAAGAAACT
TGTTTACATA AACCATATGA CTTATTTTAC
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| Protein sequence | MASVSGPSVS GKLTFPGPIG AKRRRMRSGG NASTVTNNSP GKTDGSESEP KTSGKCKGGT
TIPIFLKKTY KMIDSCDPSI ASWTEEGDMF IVKDPDVFAT QVIPQYFDHN KFSSFARQLN
FYGFRKMQSK PIRNSDFDTG TAKHVTFYNE NFKRGRCDLL KKIQRSTRGG GNTTGQDSHR
DVQNLRDQVA MLEQKMDEMS SQVEDRVRRL ELEMLARLEQ MMLAMQQQQT TQLHLQTATS
VGSNSGSGSS NGTGNHMPAP SSNQLSWDNN GLSFPRGNSI NSNVSSVTFQ QPRQQQQPLQ
QMIHQSHQLN QLDNTGMAPP TLPPHPKQKQ LPMNGFPGNM ATPPERMNSL RGISTLSRGL
SGLSRGASIE SSASAVLMRN SWEDKFFSML MLDSEQNGSS SNPHDSNVMP TPLAPGISSN
ANAQAPVTVS DRSADINGQL SAHHENNDDD LSSVSTSDMP
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