| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42820 |
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| Symbol | |
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| ID | 7196481 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1224325 |
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| End bp | 1225859 |
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| Gene Length | 1535 bp |
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| Protein Length | 419 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177244 |
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| Protein GI | 219110985 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.749474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCTAAGGTGT GTGACGATTA GCACAATATG GAGCACGATA CGGGAGGTTC TTTTCTTTCC
CCAGCGGAGC GAACGATGCT TCTAAAAGAA ATCGAAGTTT TCGAGAAGCT GGAAGCATCA
CTCAAATCAA CGAAACGCGG GAATCTTCGC AAGCCACGTT CTGTACACGC AGGGTCAAAT
AAGCCCAGGA CGAGAGATTC GGGTTTTCGA GAAGCTCCGC GCAGCACTGG TTGTCTCGTT
TGTGGTATCG ATAGGGATCA CACGAATATT CTTTTGTGTG AAGGCTGCAA TGGTGAATAT
CATACATACT GTCTTTTGCC GCCCTTGAAA TCAATTCCGC AAGATGACTG GTTTTGTGGT
GAGCTCGACG TACTAAATAA TGTTCATTCA GCTCATCGTT TTGTCCATCA AGAAAGCTCA
CTCGAATCTC ATTGATTTCT ACAGACAACT GTCTTCCAGA TGACGGAGAT GGGCTCGAGC
AGCTCGTAAG CTCATTGCCG CCGAATTTTA CTACCAGATT CGCTGAGATA TGCTGGGCTC
AAGGAGGCAA TGGCTACGGC TGGTGGCCTT GCTGCATCTA CGACCCAAGA TTAACTGTTG
GAGATGCTCG AGTCCTCGCT CGCAAAAACT TGGGCAAGAA GCACTTGGTA TATTTCTTTC
AATGCGAGGA GGCCCCTTTT GCGGTGCTTC CTACGACAAA AATTCAAGGC TGGACGGAAG
GCTTGGTTGA TAGCTTTTAT ATGGGAAAGG CGGCGAAGGC TGCAGGGAAA TGCCGTTATA
TCCAATTTCG AAAGGCTTTC CAAGCCGCAA TAATTGAAGA GAGCAAACCT CTGACACAAA
GATTAGAATG GAACCAGCTT GGATTTCCGC CCCAAGCTTC GTTAGCAGCA AGACCGGCAT
CGCCGCAGAA GACTCCGGTG AACGCGAAAA AGCGTCCAAC GGACTGTCTC ATTGAAGGTA
GCAGAACTAA GCGTGCAAAA AGTAGTGTCA GTCTCGACTT GGCACGAAAT GATATAATGG
AGAAGCGGGA GCCTGCACGT TACGTCGAAA CTTCGGAAAG CGGTACTGAA ATGTTTTGTA
AAGTTAAACG AAAGTTATTG GGGGCCGTAG ATAAAGTGGA GATTGGATTT GTGTTGTTAC
CGTGTCGATT CACTTCGACC TTCGCGGACG TGCGGAGAGC CATTTCTATT GATCTTGACG
AAGAATTGCC TTCAAATTGG GATTGGAGAT TTTACGTGCC ACCCCTTGGA CCGCTGAGCA
TAAAACAAGA ATCCAGATTT GGTGCAATGC TATCTTTCTT GCGGAAAGCA GCACCCCATT
CGGATATCGG AGAAGGGAGC CTACAAAAAC CCGCACAAGT CGTGCTGGTC GATGCGCCTC
AAAACTAATT TGCAACAAAC ATCGATTGTC GGCTTGAAGT AAATTGCTGA ACCGAAAGCT
CCCTTACTCA CGCTAATTTT CGAGTGGAGA AACACTAAAG GCGACCGTCA TGGAGTGGAC
TGTTCGTAAG GTTAAAAAGT GCCATTTGAC TTTTA
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| Protein sequence | MEHDTGGSFL SPAERTMLLK EIEVFEKLEA SLKSTKRGNL RKPRSVHAGS NKPRTRDSGF
REAPRSTGCL VCGIDRDHTN ILLCEGCNGE YHTYCLLPPL KSIPQDDWFC DDGDGLEQLV
SSLPPNFTTR FAEICWAQGG NGYGWWPCCI YDPRLTVGDA RVLARKNLGK KHLVYFFQCE
EAPFAVLPTT KIQGWTEGLV DSFYMGKAAK AAGKCRYIQF RKAFQAAIIE ESKPLTQRLE
WNQLGFPPQA SLAARPASPQ KTPVNAKKRP TDCLIEGSRT KRAKSSVSLD LARNDIMEKR
EPARYVETSE SGTEMFCKVK RKLLGAVDKV EIGFVLLPCR FTSTFADVRR AISIDLDEEL
PSNWDWRFYV PPLGPLSIKQ ESRFGAMLSF LRKAAPHSDI GEGSLQKPAQ VVLVDAPQN
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