| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42778 |
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| Symbol | |
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| ID | 7196400 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1087639 |
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| End bp | 1090192 |
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| Gene Length | 2554 bp |
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| Protein Length | 675 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176720 |
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| Protein GI | 219109935 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00214847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CATCAATCGT CGCAAAACGA AGTCATCATC CATGGCTACA CTGCTACCTA TAGAGATACA
GCAAGACTTC TATACTCCTC CCTACTAAGC GATGGAGACA AGAGCAGCAA ATCATGTTGC
TGCGGAGGAG CACAGGTGCG ACTTGGCAAA AAGTTCGCGA ATGAAAAAGG CAAGATCTGT
CGATTTTGGA CGATTTCTTC GGTCCAGTCT TCGGAATCCG GCTGATAGCT CCACCGTTGT
AGCATCGGCC TTCAGCCAAA GAGCTGCAAG GGACAACTTT TCTAACTGGT AAGTCATTGC
TGTAGAATCA GATATGGCTT TTGATCGCCC TGCCGTAAAG GACGAACTTG CGATCCGCTC
TATTTCCGTG GTTGATGGTC TTGGTGTCAC TGTCAGTGTG GAATAGTCGA CTGAGTCAAA
ATGGTGTTTC ACCATTTTTT TTCAAACCGG CCGGGCGGTG ACGTGTTTTT CGTTACAATC
GCCAGATCAA GCTCGTGCTC TGCAGAGACT AGCTTATGTT TCGACGGTGT CCGCCCAGTC
AAGATAAAGG TTCTCTTTGT CTCTGGTCAA CTTCGTAAAT TTTGTGTCCC GGAGGCGTAC
ACACAGGAAC AGCGATACCA CGCGCTTTTA CCGCGCCCTG ACAGTGAACA CATATTGCAT
TTCTAACTCG TTTTCTTTGT AACTCTTACT TCAATGCGGT TAAACCACAG TACCTCTGTT
TTCGCGCCAT CCCTGTCAGA ACAGTGCTCC GCAACAGCTA CTACAGACAA TTTGTTACTA
CGAAAAGGCT GGCCGAACGG AACCGCCATT TCCGCCGCTT CTTCATTTCC CCCGTCGGCG
TCCAGCTTCC CCATCGGAAC GTGGACTCTT GGCAAGCTTT CTGTCTTAGT TTTAGCGCTA
GCATCTTTGA CAGATTTAGC ACTTTCTCAC ATATACCGAC TAGAATCACC AGCAGACTTC
TATGACGCTC TGTCCGCCGA TGTTATTCGA CCGCCCTTTC GGTATAAGTC GAGTACATCC
ATTGCACGCA CACGGTCTAG CCTTGGTTCT GCTGCGATTA GTTCTGTCAC AGAATTTCTT
TCCCCAATCC TTCCCTTTAC TGGCGGGTTG GATCTGAGAA GGGAAGATTA TTGGACAACT
TCAGGAAGCT GGCTAGAAAC ATTGGAGTCC TTGACGAGAC AAATCCAAGA GGCGCTGTTT
TCGTCGGACG ATGACCGGAC AAGTCTACTC AGCAGTATAT CGCTTATTCG TAGCGGAAGT
CTCTCCAACA AGATGTCGCC GCGGGTCCAC ACTAAGGGAA GAAATACGGG CACTTTTACG
AAGCATGTGT CATCTATTTC AGCTCAGAAA CCGTTCTTCA GCGAAGATGA GATCGCTGAG
CTTTCTCTCG GCGAGGTAGC GCAGGCCTTC CGATATGCGT CAGAAAGCTC GTCCACAGAT
TTCAACGAGG ATAAGTTTTT GAACAGCTTG ACCACCCGAG TGCGCAGAAT GATTCTCTCC
ATCAGGGAAG CTGTCTCCGA GTCGCGCGGC ATCGATGTCG AAGATGCCTG TGTTTTGACG
AAGAATCATC GAGTGAATGG AAGCGTCGAT GCGCTGAAAT TTTCGGCCGC TATGAGAATA
TTTGCGGAAT GGCGTATCCT CCGGCAGGTT CCAGAAGGAT ACAAGGGATA TGCTGTTGGA
ATGAATCTTG GTCATAAGGA TGTCGTCCAA AACGTTGCAA AGATTGAACA GGCAGTTCAT
TCTTGGCTAG ACAATCAACG AGACTTGCGT TCGCTATCAG AAATCGAATC GCAAACCGGC
TGCCCTATAA TTGAATTGAG ATCCTCGAAT CTTTGCTCGC CAACGATTCG AGAGCTAATG
CAAGACGAAG TTGACATGGA CATTCATCCA ACAAATCGTC TACCTCGCCT GAAAGAAAAA
ACCGCGGCGA TGGGCATTCT TTGGGTGAGA CGACAGCTAC ATTACCAAAC AGGTGTTTTT
GGCAATCTGT TAGTCGTACC GGAAAGCTTT CCGACAACAG AGAGAGCAGT GGCGTCGGCC
TATAAGGAGG TTTACGACAA GTATCATGGT TGGGCTGTAC AAAAGATTTT CAGCTACTCT
TTTCAATCAG CACCAAAGGC AGAAGAAATC TACCAGCATA TGAACCCAGA ACGGCTGAAA
GAAGTCAAGG CTGCCGCTGA TGAATTGGTG TTGCATTTTG ACTCTGAATC ACGATGTTCA
GCCAAAGGAA TGAACATTTC GCCTAAGGGC AATCTGATTG ATGTCATTTT ACTGAACGCT
AGTAGGGAAT TCGAGAATCT TGTAGAGGCT TTTCTACAGC TTGTCAATTC TGGCATGGCA
TCACCAGGTT CTGACGTTCG AGGTGGCGGC TGCAACATTC ACAGCTCGGA TGAAAATGAC
AGAGAATCGT TCATTGCCAA GGAAATGATC AAGGATGCAC ACAAGCACAT TGAGTTTTAC
CTAGAGGTTG TCCGTCCACT CTTGGATGAC CTTGCCCTAG TTTTTGATGA GCTCAATATG
GACGATCCCA CCAAGGTTTA AGTCCACTTA ATGT
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| Protein sequence | METRAANHVA AEEHRCDLAK SSRMKKARSV DFGRFLRSSL RNPADSSTVV ASAFSQRAAR
DNFSNCTSVF APSLSEQCSA TATTDNLLLR KGWPNGTAIS AASSFPPSAS SFPIGTWTLG
KLSVLVLALA SLTDLALSHI YRLESPADFY DALSADVIRP PFRYKSSTSI ARTRSSLGSA
AISSVTEFLS PILPFTGGLD LRREDYWTTS GSWLETLESL TRQIQEALFS SDDDRTSLLS
SISLIRSGSL SNKMSPRVHT KGRNTGTFTK HVSSISAQKP FFSEDEIAEL SLGEVAQAFR
YASESSSTDF NEDKFLNSLT TRVRRMILSI REAVSESRGI DVEDACVLTK NHRVNGSVDA
LKFSAAMRIF AEWRILRQVP EGYKGYAVGM NLGHKDVVQN VAKIEQAVHS WLDNQRDLRS
LSEIESQTGC PIIELRSSNL CSPTIRELMQ DEVDMDIHPT NRLPRLKEKT AAMGILWVRR
QLHYQTGVFG NLLVVPESFP TTERAVASAY KEVYDKYHGW AVQKIFSYSF QSAPKAEEIY
QHMNPERLKE VKAAADELVL HFDSESRCSA KGMNISPKGN LIDVILLNAS REFENLVEAF
LQLVNSGMAS PGSDVRGGGC NIHSSDENDR ESFIAKEMIK DAHKHIEFYL EVVRPLLDDL
ALVFDELNMD DPTKV
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