Gene PHATRDRAFT_42774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42774 
Symbol 
ID7196397 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1071121 
End bp1071943 
Gene Length823 bp 
Protein Length146 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176717 
Protein GI219109929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AATTAACTCT GACTGTGACC ATGGCTGCCC ATCCCGATAC CAAAATTGAC TGCTCTAAAG 
TCTACGTCAA AAAGTCGTCT TTCTCCAACG AACAGACGGG TGACTTTGAT GGAGCCTTCG
CCTTTGTTCC GTTTCAAAAA GGTATGCTGA CGACCCAGCC CTCGACTAGT CGACGCCCAA
GGAAGAGATG ATACGACGCA AATGTCGGAC TCGAATGACA ATGCAAATTG TTATTTTGCG
ATGGGTGCTG GTGACATGTG TGAACTGTTA GCGGATTGTT AGTTTTGCCA AATGCCGATG
ACAAGGAACG ATGGATTGGA TTATTGGGCT AACCTGGCAC TACATCACTT GGGTATCTCG
TCACTTACCA CGTTTCTTGT TTTTGTTCCT TCCGCAGGTG ATCTTGTAGA AAAGGGTGTT
ATGCGTCGTC TTCCCGATGG CTTTGACGGA AACACGGTGA GTCGGATCGG AAGAAGGTTC
TCGGATAGTC TGATCCCGCG ACGGGAATTT CTTTCCTATT CGGAATGACT GACCAGCATC
TCGACTTGTT TGTTTACGTC AGTGCCCTTA CATTTTCACT TGGAGTGAGG AGCGCCCCAA
CAAGATCTGG GGCATGGGTT CGGGATGCTC ACCCTTTTTC AACACGGATC GCGAAGGCAA
GGCTAACACG CACATGGTCC GCTACTACGA CGAAGATCGC TTCGAAATCT TTGCAACCCG
GGACATTGAA AAAGACGAAG AGCTTACGCA CACGTACGTG TCGCTCAAAT GGCGAACGTG
TTTCGCGGAT ATCAACGAGA TTGTGCACAA GGACGATCCC TAA
 
Protein sequence
MAAHPDTKID CSKVYVKKSS FSNEQTGDFD GAFAFVPFQK GDLVEKGVMR RLPDGFDGNT 
CPYIFTWSEE RPNKIWGMGS GCSPFFNTDR EGKANTHMVR YYDEDRFEIF ATRDIEKDEE
LTHTYVSLKW RTCFADINEI VHKDDP