Gene PHATRDRAFT_42770 details

Gene Information

• Locus tag: PHATRDRAFT_42770
• ID: 7196145
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1055927
• End bp: 1061194
• Gene Length: 5268 bp
• Protein Length: 1086 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002177212
• Protein GI: 219110921

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCTTGTTAT TGTAGTTGTT ATTGTTGGTA GTGTTTGAAT TACAGGAACA AGCCTAAAAC 
CATGTGGGGT TCGTCGTTTA CGGACTGGGC CAAAAAGGCG CAGGAAGAAT TGCAGGAACA 
GGCGGCTCAC TTGACGGTCG CCACGCCCTC TAGTTTATTC AATCTCGACG CCATGCAACA 
ACAGGAAGAC GAAGCAGCAA CAGCCAAAGC AGAAGTGTCC GTAACAACCA ACGACGTGAA 
TGACACTGGA TCATTACCAC CACCCGTCAC GACGTCGTGG ACTTCTCCGC TGCCGCCATC 
CTTGTCGGTG CCCCGCGTCC ACGCAACGTC CCGACCAAAA CCGTCGCTCC TTGTTCCGTC 
GGCCGTTGCC GAACAGCGGG AAACACTCCG CACGTCGACC GACCGAAAGC CGCCGCAAAA 
AATGTCGTTA CCGGAAGCGA CGACTGGAGC ATTGCACGCA CCCGTACGGT CCCATGCGGA 
TGGATGGGAG GAGAATCTGG ACTCGCACGA CTTGGAAGAC GGAACCCCCG CAACCGTCGA 
CGACGCCGCT GACTATAATC CACAATCTGT TCTTCCCGAC CGAGCTGCCG TAATGGACGC 
GCCAGTGGCG CCCATCGCGG GGCATCAACC AATCCACGAT ACACGTGCGC ACGACGAACT 
CCCCCGGTCC GACGAGGAGT CGTCACGATG CACGGAAGGC TGACGACGAA ACCAGTCCCC 
GCATCAATGA ATCCGACGAG GACATGAACG ATGACGACCA CGACAACTTT GACGACAAAG 
ACGAAGGACT ACCTTCTGTT CACAAGATAC CGCTCGAATT GCCGGACGCG AAAGGCCAGT 
CTCTGTCGGA TCCGGCGACG CCAACCGCGA GTGTTGAAAA TTTGTCGTCG GTCGAGAATG 
TGGTCGACCT ACCACACGAC GCGTCCAATC CGGTCGCAGC GTTTGTCCCC GCCATCACGG 
ACCCGGATCC TACCACAACG TCCAATGGAA CGCTCGACGC CGTCGACGCG GATTTGCCTG 
CCACCAGAAT CACCAGCACT GTACCGCTTA AGAAATTGCT CGTTCTGTGT TCCATGAACT 
CTCTCAACAA GACGGCACAC AAACGTCAAG AACGAGCTTT TACCATTCTC CACGCCCGTC 
AGATTCTCTA CGACGTTGTG GACGGAGCCG ACCCGCAGCA CAAATCCTGG CGGGAAGAAT 
TGTTCACACT GGCCCACGCG GCCAAGGGAG AGTATCCGCA ATTCTTTCTC ATGGACGTGG 
ACGACGGTAG CACTACCTAC TGGGGACCGT GGGATCGGTT GGAATACGCC AACGACAACG 
GCAACCTGGC GGAAGAGTTG ACTGGACGGT TGCAGACCGG CTGGTCACCG GAAGACCACG 
TGGCGGATTC CGCTTTGCCA CCATCGCGAT TCGCCACCCA TCAACACGCT AGCGCCGTCG 
CTATGGACGA CGAACGGGAA CAATTTTCGC AGCAAATGCA ACGCGTCGAA GTCAATCACG 
CCGCCGAACG ACAAGCCCTG GAAACGGAAC ACGCCCGCGC ATTGGAACAA GCACTGGCCA 
GTACGAATCA TGACGCATGT ATCACGGAAC GGGTGGCGTT GCAGGAAAAG TACGAAACCG 
CCTTGGATCA AAAGAACGAC CAATTACACG ACCTGGTACG GGTCAACGAA GGGTACAAGC 
TCAAACTGGA AGTATTGCAA CGGGAGGTGA CCGGAACACA GCAACTCTTG CAAGCGCGGG 
ATGGTGACCT GGGTCAAGCA GCGCAAGCCC ACCACGATCA ATTGGTAAGT CTGCAGTCCC 
AATTAGTGGA AAGTTCGCAA CGAGCGACGG AAGCAAATGA GCAAGTGGAG AGTCTCAAGG 
CTGCTTTGGA AACGTCTCGA GCTGATTTGG CGGGTAGCAA GCAAGAGCTG GCTGATCTCA 
AGGCTCGCGT CAAAGTGGTG GCTACGGAGC TGAAAGACCG CAGAGTGGAG TGTCGCGAAT 
TGCATACAAA AGCGGACGAA TTGAACGCAG TCAACCTTGA CCTCAAATCT CGGGTGGACG 
AGTTGAAGTC ACAACTCACG CACCAAAACC GCAACGGATC CGAAAAACAA GAAGAAATGG 
AACAGCTCAA GGTCAAACTT GTCGACGCAG CCATCGTCTT GGAGCAGGCC GAGAATCGGG 
TGCAAGAAGC CAAGTCGGAA GGCGAAAAGG CTCTGGCTGA TTATAAACGC AAAGCGCAAA 
ATTCGTTGTC GATGGCCAAT GCGCGGACAG CGGCAGCCGT TCAGGCCAAG GAAGAAGCCG 
AGCTCGAGGC ACGGGCGGCT CGAAGTACCG CCGATTCTTC GATGGATCGG GCAGTCAAAG 
CCGAGATTGC CAGTAGGGAG GCGTTGGCGG AAGCGAAGGC CTACGTTGCG GCAATGGAAA 
AAGAAAAATC CGAGGCTATA CAGAAATTTG AAGCGGCTGG AGCCGAAACG AAGTCTGCTC 
AGGAACAAGC AGCCAAACTT CAAGAGGATT TGTCGCAAGC AGTTGAATCT AAATCTGGAA 
TTGCTGAGCA GTTGCGACAG TCGACTTCCC GACTTGAGTC AGAACAAGAA AGATCGGCAT 
CGCTGAGAGA AGAACTGTCA AAGATGCAAC ACAAGATCGC AGAAGTGCAG GACGACAGTG 
CCATTCTCCG AGCACAACTT AAACGAAGCG AATCTGAGCT TACGACTGTC AAAGAGTCGA 
TGGGCGAGGG CTCCATGGAG TCAAAACCAG TAAGCATGGA GGAAAATGGA GTGTCAGAAA 
AAGCTACCGA CAACGAAACG ATCCGAATCT TGCAAGAGGA ACTTCAGGAT GCCAACGCTG 
CTATTGAAGA AATGAAGGAC GCTTTGAAGA GCGTTGTTGA GATGAATGGC TCTGTACCAA 
CGAAATTTCA ATTGGAATCG ACAGACCAGA CCAATTATGG CTTGGACGGG TCTCGAAACG 
GAACGCATTC GAATGGGGGT AATGACGCCA CACCGTTGTT TTTCGCAATG GAAAAGCAGG 
CGGAACTCAA GACTGCACGA AACGAAATCA ATCGACTTGC GAATATTCTC GCTGACGTTC 
AATCAGAAAA GATGGAGGCG GTTGACGCAA TGGAGGACAT GCGGAGAAAG ATGGAAGAAT 
CCGAGTCGAA GCTTAATCGC TTCGAAAAGT TGATGCCGAT ACATGATCCT GGAAACACAA 
ACGGCACTTG CAGCGAGACC AACAGTGGCG CTACGAACAT TGAGTATTTA AAAAACATTA 
TGCTCAGTTT CCTTAACGCG AAGACAGCCG CTGAAAAGAA GAATCTTGTT CCAGTGATTG 
GCGCTGTTTT GTGTCTCACG CCTCACGAAC AAGCTGCTGC CGCGCAGAAC ATCGATCAAG 
CAACGAGTTT GGGAGGTGTT GGTCAGAGTC TCTTCGAATC CTTGAGCGGA CGCTTGTCTT 
GAAACTGTAG TAACCGATTT AAGCTTGCTT CTAATTGTTT ACAGATAAAA TTACTGTTCT 
GATGATATTC CTGTACTGAT CCCTTCCCCT TTTCAGGGTA CGCCGTGAAG GCGTTCCCAC 
ACTTTGTCGA AGAAAATCTT GCGCCAACCC GGCTCGAGAC GGGGCGCTCT ACTTTTCGCT 
TCTTTCAGCG AAACTAGCTG CTCTTTGATT TGAGGTGGAC ATTTACGGCA CTTCAAGATA 
TGAGCGTGAA TATTCTGTGA AGTGCTGTTA GTCGAAAGGC TCCTGGAAGA AATCGGAAAA 
TATTTCCCTA AACCTGCGTG CCCATGGCAA TGCCGACACT GAAAGCCGGG ACAACCAACA 
GGACCTTTCG ATCGTGCGAC AAAGCGATCA GCTTCTGTGA ATTGGCAGTT TTCAACCTGA 
CGCATCAGAA AGTACACATA CGACGGCACC ATGCTCATGT CATCGGTAGA TACAATATCC 
TCTCCATCTT GAAGGTACGC TCTTTTGACG GAAACGTCTG AATCACTGGC TGGTTTTTCG 
ACCTTATCGG CGCTGTTTGA GGGATCAGCT CTTCCAGAAA TATCTGTCCC AAATCGGATT 
CCGTCGTCCG TATCGACCAT CCCCAAAGAC TTTGCAGAAT CAGCCCAATA CTGTCGAGTG 
GTTGGTGTCC ATGAATCGAT ACTGCTGAGC TGAGTCAATT CTCTTTTTTC ACTTTCAGAA 
ATTTGGTGAC ATAAAGGTAG GTGGACGCGC TGCCAGCGCT TCACTGATTC GTAAAGACCA 
GACATGGAAG TAGGAAAGGA GACAGCTGCA ATGGCTACCC CATCACCTGT ACTAGTCTTG 
CAGAATCGGC ATCGAACGCC TACTTGATGC AAACCAATAC GACCCCGTTT TGAAGACCGA 
GCGACGTCGT CTTGCGTCGC GGAAAATACT TCGACGCAAT TGGATCGAAT ATAGCAGTTC 
ATTTCCGAGA GCCATTCCGG ATCAGATTCA GCATTTGCTA AGGAAATTGA CCCTCGGAAC 
CATTCCCTGT CATGACTTGA TGTAACTTCA GCTTCTTCCG TTTCCACTCT AGTACTACTG 
TGGATACGCT CTGTACGCGG ATACGAATGG TTCTTTTGCA GTGCTAGGGC GTCCATTGGA 
TGCCATACAT GTATGGGACG ATTGCTGACT AGGACACGCC GCATTTGGCA GACTTCTTCA 
TGCATACAGG CCTGCTCAAA GGTATGAAAA GAGGCGACGT TGCAAAAATC ACAGACCCAT 
TCATTCGACA TTGATTGGGC GTATGTAAGC TGACGCATCT GGCTACCTTG TGAGCTCAAT 
GGAGAAGGTA TGCATTGCCG TCCCCAGCTA GCTCCCAACC ACTCTCTAGG CATTCCCGTT 
GGAACTCCAC CTCCCCGGGC AAAACCCACG GGCAAGCGGG AAGCTTCGGC AATTCGTCTT 
GGAGGGAAAG ACTCAAGTCG AGCGACCGTC GCATCAACAC CCCCGACGTT CGGTGAAAAG 
CGGACTCTAC TCTTAATCCT TCCGGGGGAG CCCTTTTCCG GAGAGACGAC TAAGGGTCCT 
TTCTGGGGAA TGTGCGATTC CCAGGAAGGC GATCGACCAT CCTCGGGATC CCGAGCTTCA 
ACAGCTCCTT TTCGGCTGCT TAAAGTAGGA GTCATCGTAG CAAGAGAGGC CAGCGCAAAC 
GCGGACGCTA ATTCGGTTGC GCCGACAGAG TTCTTCGACG TACAAGCTCG AGATTCTTCG 
CTCAGCAACA GTTTTTGTCG CTTCGCATGC GGCGACGGGG AGAAGTTGGT AAGTTCCCTC 
CGACAGGAGC GATCTTCCGC CATCGTTTCA GCTTTATAGT GCATGGAA 

 

Protein sequence

MWGSSFTDWA KKAQEELQEQ AAHLTVATPS SLFNLDAMQQ QEDEAATAKA EVSVTTNDVN 
DTGSLPPPVT TSWTSPLPPS LSVPRVHATS RPKPSLLVPS AVAEQRETLR TSTDRKPPQK 
MSLPEATTGA LHAPVRSHAD GWEENLDSHD LEDGTPATVD DAADYNPQSV LPDRAAVMDA 
PVAPIAGHQP IHDTRAHDEL PRSDEESPRI NESDEDMNDD DHDNFDDKDE GLPSVHKIPL 
ELPDAKGQSL SDPATPTASV ENLSSVENVV DLPHDASNPV AAFVPAITDP DPTTTSNGTL 
DAVDADLPAT RITSTVPLKK LLVLCSMNSL NKTAHKRQER AFTILHARQI LYDVVDGADP 
QHKSWREELF TLAHAAKGEY PQFFLMDVDD GSTTYWGPWD RLEYANDNGN LAEELTGRLQ 
TGWSPEDHVA DSALPPSRFA THQHASAVAM DDEREQFSQQ MQRVEVNHAA ERQALETEHA 
RALEQALAST NHDACITERV ALQEKYETAL DQKNDQLHDL VRVNEGYKLK LEVLQREVTG 
TQQLLQARDG DLGQAAQAHH DQLSLKAALE TSRADLAGSK QELADLKARV KVVATELKDR 
RVECRELHTK ADELNAVNLD LKSRVDELKS QLTHQNRNGS EKQEEMEQLK VKLVDAAIVL 
EQAENRVQEA KSEGEKALAD YKRKAQNSLS MANARTAAAV QAKEEAELEA RAARSTADSS 
MDRAVKAEIA SREALAEAKA YVAAMEKEKS EAIQKFEAAG AETKSAQEQA AKLQEDLSQA 
VESKSGIAEQ LRQSTSRLES EQERSASLRE ELSKMQHKIA EVQDDSAILR AQLKRSESEL 
TTVKESMGEG SMESKPVSME ENGVSEKATD NETIRILQEE LQDANAAIEE MKDALKSVVE 
MNGSVPTKFQ LESTDQTNYG LDGSRNGTHS NGGNDATPLF FAMEKQAELK TARNEINRLA 
NILADVQSEK MEAVDAMEDM RRKMEESESK LNRFEKLMPI HDPGNTNGTC SETNSGATNI 
EYLKNIMLSF LNAKTAAEKK NLVPVIGAVL CLTPHEQAAA AQNIDQATSL GGVGQSLFES 
LSGRLS