| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42757 |
|---|
| Symbol | |
|---|
| ID | 7196134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1004474 |
|---|
| End bp | 1005648 |
|---|
| Gene Length | 1175 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176705 |
|---|
| Protein GI | 219109904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTCGACCCTT GCACACGTGT AGCCGAAGGA CTCAATCGCG ATCGTTACTA GTAAGAAACT
TGCCAACAGC CACTTCGTCC TTACGAGTCG ACGTTTACAC TACAATCATG TCCGACGCCA
ATATCAACAA TACTGCTCCC ATTAAATGGG CCCAGCGTTC CGATTCTCTC TATTTGACCA
TTGCCTTGCC CGGTGCGTCG TCCTCGTCTA TTCCGTCCCG GTAACAACCG CGCATGTTAC
TTGTTTACAG TCTGTGGAAT GTGTTCAGCA ATTACTGTTT TCGATAGTGT TCCATAGCGC
TATGCCCAGT GTACAATGTG TGTATAGCCG AGCCCGCAAC TTTACTGACT CACACACAAA
TTCCTCAATT TCCACTTTGA CCTTGTTATC GACCTTTGTG GTGCTTCCAA CTGCCAACTG
GATGGGTCTT ATTGTGCGAC AGACGTCAAG GATGAAACAA TTAATCTCGA AGACCAGACA
CTGAAATTCA AGGGCACATC GGGTGATAAG AGCTACGAAG TCAACATTGA ATTTTTCAAG
AAGGTCGACG CCAAGGATTC GACCTACAAA GTTCTCCCTC GCTCGATCCA GATGCACGTG
ATGAAGCACG AAGAGGATCG GGAGGAGTTT TGGCCCCGTC TTCTGAAAGA CAAGGCCTTG
GAGAAAAACC AAGTCAAGAT TGATTGGGAT CGTTACGTTG ACGAAGACGA GGAGGACGAA
GGCTTCGATA CGTCCGCTTT GGAAGGCGGT ATGGGTATGG GAGGTATGCC ACCAGGTATG
GGTGGAATGG GAGGCATGGG AGGTATGGGT GGCATGGGAG GCGGCGCCGA TATGGAAAGC
CTAATGAAAC AGTTGCAAAT GGGTGGCGCA GGCGGCGGTA TGGATCCTTC CATGTTTGGA
GGAGGTGATG ATGATATGGG TGATGACGAC GATGACGAGG AAGGCGGAGA AGACGACGAT
CTTCCGGATC TGGAAGAGGC GTAAAGATGC GGTCGAAGAA GTCTTGGGGA AGATACCACG
GAAAAAGGTG GTTTGGCCTC GTACGGTGCC ATTGGTCTTG CGTGTATAAA GCAGCAGGAT
AAGCGCGCTT TTTGTTGGAA TTCCCTTTCC CGCCGACAAT GAGATTTACA GATAGTATTA
GAGTAATCAA AGGTAGAGGA AACATGCTCA TCTTG
|
|---|
| Protein sequence | MSDANINNTA PIKWAQRSDS LYLTIALPDV KDETINLEDQ TLKFKGTSGD KSYEVNIEFF
KKVDAKDSTY KVLPRSIQMH VMKHEEDREE FWPRLLKDKA LEKNQVKIDW DRYVDEDEED
EGFDTSALEG GMGMGGMPPG MGGMGGMGGM GGMGGGADME SLMKQLQMGG AGGGMDPSMF
GGGDDDMGDD DDDEEGGEDD DLPDLEEA
|
|---|
| |