Gene PHATRDRAFT_42743 details

Gene Information

• Locus tag: PHATRDRAFT_42743
• ID: 7196128
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 947078
• End bp: 949270
• Gene Length: 2193 bp
• Protein Length: 669 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002176692
• Protein GI: 219109878

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.599119
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATAACCAAA GTCGATCGAC GCCATACCTT GGACAAGCAT CTTCGACCAT GAAGAGAATC 
CACGGAGCCC ATAGCCGTCC GGGAACGAAG CCTCTGTCGA TGGATACTAC GCTCGACGAT 
GCCGATGTCT ACACGGTCTC GTCGAATGTC GATCCCGCTT TTTCCTTGTC CTCGTCGGTG 
CCCCAAACGC GGACCCTTGA CTCCACGAGA TCAGAGCGGA TTGGTAGGAG CCGGAAACAA 
CCATCGGCTT CAATGACTCA GGGAAGGAAA CCTCTGTCGA TGGATACTAC GCTCGATGAT 
GCCGATGTCT ACACGGTCTC GTCGAATGTC GATCCCGCTT TTTCCTTGTC CTCGTCGGTG 
CCCCAAACGC GGACCCTTGA CTCCACGAGA TCAGAGCGGA TTGGCAGGAG CCGGAAACAA 
CCATCGACTT CAATGACTCA GATAAAATGT AAAGCAAGCT TTGAAAGACA GTACGATCTT 
ACTCCGCTTG GTCTTACAAC GGATGCCGGA GCTTCCTCTA GATTTTCCCT CGATCCGTGG 
GAGAACGATT CGGAAAGCAA AAAAATGGTA AAAGAACAGA CTAGCACATC CAATCGGTAA 
GTGGTATCAC TATGATAAGA CGTCCGGATA GTCAAATTCA CATGGTGCTC TCCTATTATG 
AATAGATCGA ACCAGTTACA GAGGAAGGCG AGCGATACCT CTCCATCTAG TGACGATACC 
GAAGAAATTC ATTTCGTGGA CGAATCGCCA AGTGTGATGA GCACCTATCT AGATCCTGAA 
GAGATTCATC TGAGTATGGA AGATAGAGAA GAGGAAATCG CTCAGTTGCG GCTTTTGGCC 
GGAAAGCTGT CGGCGGATTG GAGAGCTCAG GACTTTGTGG CCCCGGCTCT GGCTAGGCGA 
ATGAGAGATT TCCATTTCGC TCAGGAAAAG CGGCGCAAGA AGTACGGGGA CGAAAGGCCT 
TGGGGAATCC TCGGGTTGTA CGATCATCTT TCCGCAATTC GCATTGATGT ACAGTGGGCC 
GAAGATGCAG CTTGGAGACG GGCCAATGGA GAACCTTACC TTTCCTGGGC GGACTTTGAC 
GAGAGCAAAA AAGGTGGAAA GAATCGACCC TACTTTACCT ACGTTCTTTT GTTCGTCTGC 
ACTGCCAACA TGATTGCGTC TATTGCGGCG AATGATTGGA CTGTGGAATC TTTGGACGAG 
AATCCCATGA TTGGGCCCAG TGCTGCGACG CTCATTCGAA TGGGTGCGAA AGACTCCTAC 
TTGATTGTAC ACGCCGGCGA AGGGTGGCGT TTGTTAACCT CCACGATTCT CCACGCGGGT 
TTAGTTCACT ATTTCATCAA TATGCTAGCC TTATGGTTTG TCGGTGGAGC TATCGAAATG 
AGCCACGGGT GGATCTCGGC CATGATCATC TTCAGCAGCT CCGCCATTGG AGGGATTATC 
CTTTCCGCAA TTTTTCTCCC GGAATTCATT ACCGTAGGTG CCAGCGGAGG AATCTTTGGT 
TTCATTGGGG CTTGCCTTGC CGACATTATC ATGAACTGGA AGCTTCTCTT TGATGGGCTT 
CTCGATGAGA ACGGAAAAAA ACATCAGCAC ACTATGGTCG TTGTCGTGTT GCTCTTCGAT 
ATAGCATTGA ATTCAATCAT TGGGTTGACG CCTTATGTGG ACAACTTTAC TCGTAAGTAT 
CGCGTGTTGA CTGGTTGATC AAATACTCGC ATCTCACGAA TAAGAATGCA CCTTGCAGAT 
TTGGGAGGAA TGGCCTATGG CTTTCTCTGT GGGCTCTCTA CCATCGAACG GCTGTCCAAA 
GATTTTTTTG GCTTAGAGGA GTCTTGGATG GTTCGAGCCA AGAACTTTTG CGTGCGCTTT 
TTTGGAATTA TCGTTACTGT CGTTTTTATT TGCGTAACTG CAATTATTTT GATGGGAGGC 
GATGGCGTAA CAACTCCCTG TACAAATTGT AGTTGGCTCT CCTGTGTCCC TTTTCCTCCG 
TGGCAGAGTC AAAGTAATAA ATGGTGGTAC TGTGATGATT GCGGCCGTAT CACGGCCGAA 
ATTATTTCTG AGCCCTATTT ACACCTAGAA CTCGACTGCC CGGGCGGTAC AATTGGTTTC 
GTCAACGTAA CAAGCGATCA GTTGGACAGA GGCAAACTGG AACAAAGTCT TCCTTCCTAC 
TGCCGTCAGT ATTGTCCCAT CAAAGAGCTT TGA 

 

Protein sequence

MKRIHGAHSR PGTKPLSMDT TLDDADVYTV SSNVDPAFSL SSSVPQTRTL DSTRSERIGR 
SRKQPSASMT QGRKPLSMDT TLDDADVYTV SSNVDPAFSL SSSVPQTRTL DSTRSERIGR 
SRKQPSTSMT QIKCKASFER QYDLTPLGLT TDAGASSRFS LDPWENDSES KKMVKEQTST 
SNRSNQLQRK ASDTSPSSDD TEEIHFVDES PSVMSTYLDP EEIHLSMEDR EEEIAQLRLL 
AGKLSADWRA QDFVAPALAR RMRDFHFAQE KRRKKYGDER PWGILGLYDH LSAIRIDVQW 
AEDAAWRRAN GEPYLSWADF DESKKGGKNR PYFTYVLLFV CTANMIASIA ANDWTVESLD 
ENPMIGPSAA TLIRMGAKDS YLIVHAGEGW RLLTSTILHA GLVHYFINML ALWFVGGAIE 
MSHGWISAMI IFSSSAIGGI ILSAIFLPEF ITVGASGGIF GFIGACLADI IMNWKLLFDG 
LLDENGKKHQ HTMVVVVLLF DIALNSIIGL TPYVDNFTHL GGMAYGFLCG LSTIERLSKD 
FFGLEESWMV RAKNFCVRFF GIIVTVVFIC VTAIILMGGD GVTTPCTNCS WLSCVPFPPW 
QSQSNKWWYC DDCGRITAEI ISEPYLHLEL DCPGGTIGFV NVTSDQLDRG KLEQSLPSYC 
RQYCPIKEL