| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42728 |
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| Symbol | |
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| ID | 7196122 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 913306 |
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| End bp | 915338 |
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| Gene Length | 2033 bp |
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| Protein Length | 505 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176682 |
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| Protein GI | 219109858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGGTCT GTCGCACGGG TCCGTTTCAA CACTGTATTC CTCGTGTGCT TTTTTAATTT
CGTGTCGGCA AGCATCCAAA ATTATCACGA TGAAGTTTGC AACGGCTGTC ACGATCTTAT
CTTTGGCTAC GGCTTCAGCC TTTGTCCCTA CTACAATCTC CACTAGTAGG GTGAGTGTTA
TCTATAACTG TGTCTATGTC TGTGTCGTTG TTGTGGTAAA CGGACGCTGT TCGAAGTAAA
ATTCGAGTTT GACTGTAAGG AAAGGTGTCA AAGTCCTGAA TAGGCGCTTC GTATACCGTA
TATGGATCGA TCTTTTTGGG CAATTTAGGA TCGTAACACT AAGGCAATTG GTGTTTCACC
GTGAATCATA CATGCGGCTC ACAGTGCATT TCTTTCTGGC TGCGCGTTAG GCGACTTGTC
TGTACTCGGG TGTTCCGGGA GGATGGACTC CGGGCAGTGG CGGTGGAGGT GGCTGGGACG
ACAACAGTAG TAGCGGCGGC GGTACCGGCT GGGGTGCTCC AGCCGCCCCC GCTCCGGCAC
CGGCGGCTCC TTCCGGTTGG GGAGCTCCGC CGGCACCGGC TCCTGCACCG GCCAACGGCG
GCTGGGGCGC TCCCATGGGA GGCGCCGCAC CGGCCGACAA TGGCTGGGGC GGAGGTGGAA
TGGGTGCGGC GGCGCCGGCC GTGGCGCCTC CGGCACCGGC TCCCGCCAGT AACGAAGGTA
ACGCCAATCC CTTCGGTACC AAGTCGCTGG ATTGGGGTGG CAACGATAAC GATCCTAGCT
CAAAAACGGT GCGTCTGCGT GATCGTCTCA ATGAAGTGGA TACGGAGCGC CGTAAGAACG
AAGAGGAAGC CGCTAATCGT GAACGCGCGG CCGAAATTCG GAAGGAAGAA CGTCAGAAGA
AGATTGACTA CATGAACAAC ATGCCCGATA GTCAACCCGC TGGTACCGGT AAGTGGTGTG
ACGTGGAACA GAACACAACG TCGGAGACTG TGGCTCTTGA GGCACTTTAT TGACTCACTG
TCCATTACTT GTCGTGTCAT TTTCTTTGCA GTGGAGGAAT TCATGTTCAA GGAAGGTGTC
CAGGATCAGC TCGACAAGCT GGATCGCGAA CTCGTTGGTC TTGTCCCCGT CAAGAAGCGC
GTCAAGGAAA TTGCTTCCCT CCTGGTCCTA GATAAGATGC GCCGCAAACT TGGATTCGAA
ACCGCCGTAC CCTCCCTGCA TATGTGTTTC ACGGGTGCTC CCGGAACCGG AAAGACTACG
GTCGCTGTTC GTATGGGACA GATCCTGGCC AAGATGGGTT ACTCTCGTAA GGGTCACGTT
GTCCTTGCCA CGCGTGACGA TCTCGTCGGA CAATATGTCG GTCACACCGC CCCCAAGACC
AAGGAAATGA TCAAGAAGGC CATGGGTGGA GTGCTCCTGG TTGATGAAGC TTACTACCTC
TACAATGCTG CCAACGATCG TGATTATGGT CAGGAGTCCA TCGAAATTCT TCTCAACGTC
ATGGAAAATC AGCAAGAAGA TTTGGTTGTG GCGCTCGCCG GATACAAGGA CCGCATGGAC
AAATTCTTCT CCTACATTCC AGGTATGATG TCTCGTATCG GAAACCACAT TGACTTCCCC
AACTACAGCG CGGACGAATT GGTGCAAATT GCCTCCGTCA TGGCCAGGGA ATTGGAGTAC
GATATTGACG ATAACGCCTA CCCAGTCTTC AAGGCTTACA TCGAGAAACG CATGACCCTG
CCTTTCTTCT CCAACGCCCG TACTGTCCGC AATGCCATGG ATCGCGCTCG GATGAATTCC
GCAATCCGAA CGTTCGAACG TTTCGCAATC AACGGAGAAA ATGGTGGTAT CTGCACGGTA
TCGGACTTGA AGAAGATTCA GGCTGACGAC TTCCAAGTGT TGCTTGATGA TATCAACAAC
GCCGATGTTT CCAAGCGTAT CTTTTCTTAA ATCGTATAAC TGCCGGGTAT TAGCTACATT
GATTATGCCG CCTTTTTGTT TCGCGTGACG ACTCTATCAG GTACATTCGG TTG
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| Protein sequence | MKFATAVTIL SLATASAFVP TTISTSRATC LYSGVPGGWT PGSGGGGGWD DNSSSGGGTG
WGAPAAPAPA PAAPSGWGAP PAPAPAPANG GWGAPMGGAA PADNGWGGGG MGAAAPAVAP
PAPAPASNEG NANPFGTKSL DWGGNDNDPS SKTVRLRDRL NEVDTERRKN EEEAANRERA
AEIRKEERQK KIDYMNNMPD SQPAGTVEEF MFKEGVQDQL DKLDRELVGL VPVKKRVKEI
ASLLVLDKMR RKLGFETAVP SLHMCFTGAP GTGKTTVAVR MGQILAKMGY SRKGHVVLAT
RDDLVGQYVG HTAPKTKEMI KKAMGGVLLV DEAYYLYNAA NDRDYGQESI EILLNVMENQ
QEDLVVALAG YKDRMDKFFS YIPGMMSRIG NHIDFPNYSA DELVQIASVM ARELEYDIDD
NAYPVFKAYI EKRMTLPFFS NARTVRNAMD RARMNSAIRT FERFAINGEN GGICTVSDLK
KIQADDFQVL LDDINNADVS KRIFS
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