| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42721 |
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| Symbol | |
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| ID | 7196118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 892321 |
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| End bp | 894669 |
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| Gene Length | 2349 bp |
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| Protein Length | 773 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176677 |
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| Protein GI | 219109848 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACAGTCAG TGGAATATCG AGCACCAATG GCCGCCGCCA ACGTCAAAGA GGTATGGAAA
CCTGTGCGAA AATCCGTCCT GTACCTCATT GCGGCAGTCG CGCTTGCAAT CTCGGCATCG
ACGGTTGGGG GTAACTCATT GCCGGCAGGT AGTAGAACGC AGGTCGAAGC CGTGGACGAT
GTCGGTACAA GTGCGCAAGA TAATAGTCAC TCCCGCCGCT TGCTAGGTTA TCAACGAGTC
ACGGTTTACA CAACAGCTCC GGAAGCCGAT CAGGACAATC CGATTGCACG CAAACAGTTC
GCCGACTTGA TCGCCTCCCT GCCCACGGAT GTGACAACCC TCGATGTTGT TGCCTTAAAC
TTAATGGAAC AACGCCATTT TCTGGAGCAG AATTGTTACG GGAAAGAGGA GGACAACATG
CCCGTAAAAA TGAGCGCTCT GAAGCGTTTC GACGAACTGC GTACGCGTGG ACAAGATCAT
CTCGCAACCG AAGTCTACAA GTGGTGCGCG TTGAAAACGA AACCCTACCT CTCTGACTCG
GTGGCGTACA TTGATTCATC CAGTCCATTG CTGATGCGAC TGCAAGACTT TTTGTCGGAC
GTACAAAATG TGGTAGTCTT AGGAGACGAT TATTTCCCCC ACACTGCTCA TGGCAGTCTG
ATTGTGTTGC GCGATAATCA ACTCTACGTA GCGGAACAGA TGATGAAAGT TCTTCTGGAA
ACTCCGGCGG AGCACTTGGA AGTAAACCCT CTTCTTTTGC CGCAGCGCTT GTACGAAGCG
GTGGCGTTCG CTTCCGCCAA AAAGCATCCT AAACCGGGCA AGGTGGGCGA TTTCCTACTG
TTGAAAGAGA CATGCCGAAT GGATCCCTTG AGGCGCCACA ATGATGATGC AAAAGGCTGG
ACGGATACAC AAACTCGTCG CCACGTACAC CACTGCCCCG AACGTGCAGG CTTTTGCTGC
TCAATTCACG ACATATCTCG TAACCGTGTC GTCCTCATGA GTCGTCATCC TCTGTTGCCA
TTTCAAATTC TGTCCCAATC ATTTTCTCGG CCTTACAACG CCGAAGCGGA TCACTATGAA
GAAGACGAGC TGCCCTACAT CACCACAATC CAGGCTACTT TTCACGAGCG GCCTGCGGAT
ATGCCCGAGA CACCTAACTT TTACGCCTTG CTTGCCGCGA AAGATTGCTT GCCCGACAAA
GAAGAATGCT CTAAGTGCTG CCGAAACCAG GCCGGTGCTA CAAGGGAACT ATGTGCCAAA
GACTGCCCTT GCTATGCGAA GGCTCTCTGT TCGGATAAAC CTCCACCAAA GCATGTTGCT
CATACGTGGA CTGTAACCCC ACCGGCCTAC ACGCGCGATC CCAACCGTGT TGTTCCCCGT
ATCGTACACC AAACTTGGTT CGAAGACCTA GCCCAGGACA GGTACCCAAA TATGAGCCGC
ATGGTCCAAT CGTTCCGTAA CTCTGGCTGG GAGTACAAAT TCTACAACGA CGATGACGCA
GTTAATTTTT TGAGTACGCA CTTTCCGCCG GAAGTGCGAG AAGCATACGA AGCTCTTCGC
CCTGGTGCCT TTAAGGCCGA TCTCTTTCGG TATTGTGTGC TGTTGATACA CGGTGGTCTC
TATGCTGACG TTGACATCAT GTTGGAATCG GCTTTGGATG CGGCCATTGG ACCGGATGTA
GGATTTATGG TTCCGACAGA CGAGCCCGGC ATGGCCACAA ATCACCGGAT GTGTCTATGG
AATGGAATGA TCGCCGCCGC TCCAGGTCAT CCGTATCTGG CGAAAGCCAT CGAAACCGTC
GTGAATCAAG TCCGAAACCG ATTTACATCT GTTGATATTG ATGCCACCCT CTGCCCCAAT
CCGGAGCTCT CCATCTCGCA CGCTTATGAT ACTCTCTTCA CTGCAGGACC GTGCTTGCTG
GGTGCCTCAA TCAATCGAGT TCTGGGACGG CATCCACAAA AATCCTTTAC AGCTGGGGAA
ATTAACATTT TGGCTGATCG CCGACAATTA GAAGCCGGTA CATCGTTTAT TGTCGGAGAC
GGTGTTGCAT TGGAGGCACG CGTGCCAGGA AGGAGTGTGA TTTTGAAGCA GGACAAGTGG
GATATGGGCG CGCATCGATT TACCTACGTG GAGCGCAACT TGGTTGTCTC GGCCACAGAT
CTGCAAGATT CAAATGATAG GGACACTCAC AAAAAGAACA AAAAAACAGA GCATTACAGC
ACGACACACG CCAAGACGGG TATTTATGGA TTGGAAGGTC TGTACACAGA CACACGTATT
GCAAATGAAG ATATTCGGAT TATACTGGAT GTTTCCAAGC AGGCTAGTGT CCCATCGTCT
ACGTCTTAG
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| Protein sequence | MAAANVKEVW KPVRKSVLYL IAAVALAISA STVGGNSLPA GSRTQVEAVD DVGTSAQDNS
HSRRLLGYQR VTVYTTAPEA DQDNPIARKQ FADLIASLPT DVTTLDVVAL NLMEQRHFLE
QNCYGKEEDN MPVKMSALKR FDELRTRGQD HLATEVYKWC ALKTKPYLSD SVAYIDSSSP
LLMRLQDFLS DVQNVVVLGD DYFPHTAHGS LIVLRDNQLY VAEQMMKVLL ETPAEHLEVN
PLLLPQRLYE AVAFASAKKH PKPGKVGDFL LLKETCRMDP LRRHNDDAKG WTDTQTRRHV
HHCPERAGFC CSIHDISRNR VVLMSRHPLL PFQILSQSFS RPYNAEADHY EEDELPYITT
IQATFHERPA DMPETPNFYA LLAAKDCLPD KEECSKCCRN QAGATRELCA KDCPCYAKAL
CSDKPPPKHV AHTWTVTPPA YTRDPNRVVP RIVHQTWFED LAQDRYPNMS RMVQSFRNSG
WEYKFYNDDD AVNFLSTHFP PEVREAYEAL RPGAFKADLF RYCVLLIHGG LYADVDIMLE
SALDAAIGPD VGFMVPTDEP GMATNHRMCL WNGMIAAAPG HPYLAKAIET VVNQVRNRFT
SVDIDATLCP NPELSISHAY DTLFTAGPCL LGASINRVLG RHPQKSFTAG EINILADRRQ
LEAGTSFIVG DGVALEARVP GRSVILKQDK WDMGAHRFTY VERNLVVSAT DLQDSNDRDT
HKKNKKTEHY STTHAKTGIY GLEGLYTDTR IANEDIRIIL DVSKQASVPS STS
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