Gene PHATRDRAFT_42720 details

Gene Information

• Locus tag: PHATRDRAFT_42720
• ID: 7196117
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 889474
• End bp: 891661
• Gene Length: 2188 bp
• Protein Length: 694 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002177184
• Protein GI: 219110865

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGGTT GGGCAACGCA ACAATTTGAG AAACTTTCTC AGACGGTTGC GCCACCACCG 
ACCGACCCAG CCTCCCGCTT TGTCTTCTGC TGCCAAAAAC TCGATGAAGA CGGTGCCATT 
AAATGTGTCA GTGAACTGTA CGGCGTGGCA ACGATCGTTG TAGCTGTCAA GGGTCAGGTG 
CCATTGCACG TTGCCTGTAC GTACGCATTG CCTACTTTGA TACGCCATAT TTTGTCCCAA 
CCGGGAGCCG ACCCGAACGT CGTCGATGCG TCCGGCAACA CACCTTTGCA CTGTGCCGTC 
ATGTCCAACA ATCAAGAGAC CACGTTGATG GTTGTAAAAA TGCTGCTGCA AGAGTACCAG 
GCTTCAGTCT TGGCAAAGAA CGCTTCTGGG CAAACACCGT ACGATGTTGC CAGTTTAAAT 
ATGGTGCGGC AGTTTTTACT GCCGCTGCAG TTGCAACAAG AAACGCAAGC TGCTCTAGAC 
AACGGAGGTG TTGGATTGCC GCCAGGAATT GATATGGGTG GTCTAAAGAT TTCGAATGCG 
CATCTGCCGC CACCCCCCCA TGGCCCCCAC GAGCGGCGGA GGCATGTCGT TGACGAACAC 
TGGTGGGACC CGCTACGCAC CACCACCCTC CTTGGTAACT GGACCCCCAG CAACATCCAC 
TGCGCCATCG GCACATTATA CATCACCGTC ATCGGTACAC TCGAGCGTGT CTCCGCACGG 
TTCTACCCTA GTCCCTCCTG AATCTGGGGG CACCGTTTCC GGAGCTCCTG GACAGGGGCA 
TCAATTGGCG TCTCAAACAT CGCAGCCAGC TGTGAGCACG ACATCTCCAT CAGTTGCAAC 
AGTCTCTCCA TTGGCGATTC CCGGCCCCCC TTCATCGGGG AACTCGGACT ATGCTCGAAC 
GGGATCATCC TCGGCCGCCT TCTACAAACC ATCAAGTCAG AGTGGGCGAA GTTTCATCCG 
ACCCGACGGC TTCCACTCAT CAAGTTCCGA CAAGTCTTTG CAGCAAAAGT ATGGACACGA 
TACCACTGCA TATTCCAATG CTCCGCCCCC GCCGATGAGC TCAGGAAACG CAATAACTTC 
GGCGCCGTCT TCACTGAACG GGAACGCCGG TCCAAATCCA TTTGCCGGTG GAGCCTCCGC 
GATGCGGCAA CGGGGATCTG GCCGCTACGT TGCGTACGGT CCCGTGAGTA TTCATCCCCA 
TTCTTTCAAT GGAGCTACAA ACGCGGGGTC GGTGCCGATT CCCGCTTATA CGAATTTCGC 
TCCTGCCCCC GTCACGGGAC AAGACTCAGA ATTTTCGCAT GCCTCTGTGT ATTCTCATCA 
GGAAACACTG TCTGGCGCGG GTTTAATTTC TACAAATACA CCAAATGGAT CCGCACAAAA 
TATACCTTCT CCGGTCGCCA CTGGTTCCGT TACGGCAAAC TTTCCACCAC CACCCTCCAG 
ACAACAGCCC GGTGCACTCG CTGCTCAAAA TTCTCAACGG GAGGTGTCAG GTTGGTCCCA 
AACATCTCGA TCTTCGAGTA TGGGTTCGAC TCCTAGTGGT CACGGTATTG CCCGCGTATC 
AAGCACGAAT TCGGCTGCCG ACGTTTTTGC AACGCCATCG CCTGATAAGG CCCATCGACC 
TGCTGCTGAG CAGTCCACTA TACCATCGCC CCAAAATCTC CATCAATCCA TGTCGGAACA 
AAGTCCAGCG TCAGCCTTGT TTTCCAAACC GAGCCCAACG GTGGCAGCCG ACATCTTTGG 
GGCCCCTAAA CCGGAACCCT CAGTCACTGA AACGTTTGCA CAAGGCAGCG GTGCACCAAT 
CGTGACTGAA GGCTCCGGGG GAACAACTAC TGTTCGACCC TCACAATCAG TTCAGTCAGG 
AAACTTTCCG TTGGTTGCAC CTGGCCCGGG AAACATTGCT GCCGATCTTT TCTCAAAACC 
TGCTGTGGCT AGTGCAATTC GAAATCCAGT CGCTGTGGCC GAAGCAGGAT CAGGTTTCCC 
ATGTAGTCAG AACCAATCAT ACGTCCCGTC TCCAGATGAC TCAAATGTTC CCGCGGAAGA 
CGGTGAGGAT ACCATGCACG AAGTGCCTTT AACACCATCT ATCGAACCGC CGAAGCAGGC 
AACTGGCACT GCCTCCGATT TGAAGGGTAC AGAAAATGCC TTGTTCCAAG CCATAGGTAT 
GCCACCTCCT CCCTTTTCCA AGAAGTAG 

 

Protein sequence

MFGWATQQFE KLSQTVAPPP TDPASRFVFC CQKLDEDGAI KCVSELYGVA TIVVAVKGQV 
PLHVACTYAL PTLIRHILSQ PGADPNVVDA SGNTPLHCAV MSNNQETTLM VVKMLLQEYQ 
ASVLAKNASG QTPYDVASLN MVRQFLLPLQ LQQETQAALD NGGVGLPPGI DMGGLKISNA 
HLPPPPHGPH ERRRHVVDEH WWDPLRTTTL LGNWTPSNIH CAIGTLYITV IGTLERVSAR 
FYPIATVSPL AIPGPPSSGN SDYARTGSSS AAFYKPSSQS GRSFIRPDGF HSSSSDKSLQ 
QKYGHDTTAY SNAPPPPMSS GNAITSAPSS LNGNAGPNPF AGGASAMRQR GSGRYVAYGP 
VSIHPHSFNG ATNAGSVPIP AYTNFAPAPV TGQDSEFSHA SVYSHQETLS GAGLISTNTP 
NGSAQNIPSP VATGSVTANF PPPPSRQQPG ALAAQNSQRE VSGWSQTSRS SSMGSTPSGH 
GIARVSSTNS AADVFATPSP DKAHRPAAEQ STIPSPQNLH QSMSEQSPAS ALFSKPSPTV 
AADIFGAPKP EPSVTETFAQ GSGAPIVTEG SGGTTTVRPS QSVQSGNFPL VAPGPGNIAA 
DLFSKPAVAS AIRNPVAVAE AGSGFPCSQN QSYVPSPDDS NVPAEDGEDT MHEVPLTPSI 
EPPKQATGTA SDLKGTENAL FQAIGMPPPP FSKK