| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42683 |
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| Symbol | PLC-delta |
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| ID | 7196334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 779867 |
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| End bp | 782464 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | phospholipase C isoform delta |
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| Protein accession | XP_002177161 |
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| Protein GI | 219110819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0090149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCTA CTTCCATAGT GAGAAGCAGC AAGAAGAAAG GGACAAGTAT AAATTCCACG
GGCATGGCAG CTCCTAAAAC AAGGGTGTCT TCCAAGCAGC ATCGCATACA CTTTTTACAC
GCTCTAGGAT TCATCAAAAT CCCTCGTCAC TTATATGAAG GCGTACGAGT GCTCATTGTT
GCCGCAAGCG GCAAGACTCA ATCCGCACAA CTTCGGCTTT CGGCGGATAA GTTTACTCTA
TGGATCCGAA CGACAAAAAA TGCCAAATCC TACTTTGCCA AAACAGTCAC GGAAGACCGG
GCAATCGATG TTGGTGAAAT TGATCGAATT CAACGAGGGC AGTCAACACA ACAGTTCGAA
AAAGCCAAAA AGAAGCAAAT ACACGGTACC CCTACAACTC CCGTTGCGCA ACCTAAACTA
CATCGCAACA TGAGCTCGGG ATCCAATAGT GTGACCTCGT CGTCCGCCGG TGGCGCCTCA
TATAGTACTG CGATGATTCA ACATTTTGAT CCAGAGCTTT CCTTCAGTAT CGTTTTCCGC
GGTGCCCATA CTCTAGATCT TATGGCCATG GAGGTAGACG AATGCGACGA GCTAACGACG
ACGCTGGATC GAATTTTGGA GGCTTATCAA CGAGCCAAGA CTCGTGTCGC TAACGACGTA
CTCTTGCTAC GGTACGTATG GCTCGACGTA GATAAGGATA AGACGGGGTA CATGAATGTG
TCAACGATTG GCAAAGTGTT TGGACAAATC AATTTCGAAA TGAAGACGAA GGATCTGCAC
GCGAACTACG AAAAGTTTGG CAAGATCTTG GGTTTAGATA GGAGTGGTCG TCGAAGAGGA
CTGACTTTTG AGCAGTCAGC AGGATTTTTG CACTATATAA GGAGGAACAC GTGGATGGTG
AAGCCTGTAA ATGTGATTTG GAACGAAATC TTTGGAGAGG TAATGAATAA CGGCAAGAAG
AGGGAGACGG TTTCAGACAA GACATTTCTC GAGCATTTCA TGCGTGGGAA GCAAGGACAA
ATGAAGACCA CAATTTTAGA CGTTCGCAAG CTCTTTCGGA AAATGCATGA TATGGAAATT
TCGCACGACT CGTCTGCGGA AAAGATGGAT CTGAATCGAA TCACAAAGGA TCAGTTCGAG
GCCTTCCTAT TCGCAAGCGA GAATGATGCA TTCGATCCAG AAAAAGAGGA GTTTGACATG
TCTGATATGA CTCAGCCACT GTCAGAATAT TGGATCAATA GCAGCCACAA TACATATTTG
GTCGGGGACC AGTACACATC ACAATCGAGT GTAGAAATGT ACTCTAATGC ACTGTACCGT
GGTTGTCGAT GTCTCGAACT CGACATTTGG GATGGGAGCA AGACTTTGAA TGGCACCCCA
ATCCCGGTGG TGTGGCACGG TCACACAATG ACAACGAAGA TTCTTTTTGT TGAGATTATC
AAGACTATCA AAGTATTTCT GAATTTTCAT CCCGACACCT TTCCTCTTAT TCTCTCCTTT
GAAAATCACT GCAGCCTGGC GTACCAAGAA GTAATGGCGG AGCAATTAAT CCGAGTTTTG
GGTGCATCAC TTTACATTCC CACCGAGGCG TCTCTTCATG GCGAGCTTCC TTCGCCCAAA
CAACTGCGTG GAATGGTAAT TATTAAAGGC CGCCGCCCAA ACGGTACAGA AGCTGATGCG
TACGACACTG ATGATGACGC CTCCGTTGAT TATGGTGCGA CTAGTTTGAT CGGTGGGTTA
GTCCTGGACG GTCTGGAGGA AAACGCCAAT CTAGAAAAAC ACGGTGTTTC ACCGAATCTA
GCGAGGTTGA CACTATTTCA CGGGAACAAG CACAAAACAT GGGAAGAGTC TTTGTGGTCT
CCGCGTTATC ACATGCACTC GTTCAGTGAA AACAAAGTTC GTAGCAAATG CAGACACAAG
GAAGCGCAAA CATGGATCAT GTACAATCAG TCGCACATGA GTCGGACCTA TCCTGCTGGA
GCACGTGTAG ATTCTAGCAA CTACAACCCG CTCCTTGCAT GGTCGACAGG GTGTCAACTT
GTTGCATTGA ATTTTCAAAC TCAAGATGCC TTTCTGAAAC TGAATGATGG GAGATTCCGA
GAAAATGGGA ACTGTGGTTA CGTGCTTAAA CCATCGTCGC TGATGGTCAA TGATGGATAT
TCCCCCAATC GTGCAGCGGT ACGCATTTCT ATCCGGGTTT TGAGCGGTTC GTGTTTGCCA
AAACCGATAG GACAGCGAAG CGGAGACTGC ATTGATCCTT ACGTCAAGGT TTCGGTATTC
GACATAAAAA ATGACGAAAA GGAAAGCATA ATTTCATATC CAACGTCCAT TGCACACGCC
AACGGTTTCT TTCCAATTTG GTCTCAGGAA AAGTTTTCCT TTACTATAGA AAACTGGGCA
GTCGCTATGT TACAACTGAC TGTATACGAT AAGACGAAGG ATGAGTTCAT CGCAAGCTCT
TCCATTCCTG TATCCTGCCT GCGGCGAGGA ATTCGGAGTG TTAAACTGTA TGATGCCACG
AATACTCGGA GTGGCGCATT CGCTTTTGCT TCGCTCTTAC TGGATCTAAA GATGGGCCAT
GTAGTTGCGG AAATTTAA
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| Protein sequence | MPPTSIVRSS KKKGTSINST GMAAPKTRVS SKQHRIHFLH ALGFIKIPRH LYEGVRVLIV
AASGKTQSAQ LRLSADKFTL WIRTTKNAKS YFAKTVTEDR AIDVGEIDRI QRGQSTQQFE
KAKKKQIHGT PTTPVAQPKL HRNMSSGSNS VTSSSAGGAS YSTAMIQHFD PELSFSIVFR
GAHTLDLMAM EVDECDELTT TLDRILEAYQ RAKTRVANDV LLLRYVWLDV DKDKTGYMNV
STIGKVFGQI NFEMKTKDLH ANYEKFGKIL GLDRSGRRRG LTFEQSAGFL HYIRRNTWMV
KPVNVIWNEI FGEVMNNGKK RETVSDKTFL EHFMRGKQGQ MKTTILDVRK LFRKMHDMEI
SHDSSAEKMD LNRITKDQFE AFLFASENDA FDPEKEEFDM SDMTQPLSEY WINSSHNTYL
VGDQYTSQSS VEMYSNALYR GCRCLELDIW DGSKTLNGTP IPVVWHGHTM TTKILFVEII
KTIKVFLNFH PDTFPLILSF ENHCSLAYQE VMAEQLIRVL GASLYIPTEA SLHGELPSPK
QLRGMVIIKG RRPNGTEADA YDTDDDASVD YGATSLIGGL VLDGLEENAN LEKHGVSPNL
ARLTLFHGNK HKTWEESLWS PRYHMHSFSE NKVRSKCRHK EAQTWIMYNQ SHMSRTYPAG
ARVDSSNYNP LLAWSTGCQL VALNFQTQDA FLKLNDGRFR ENGNCGYVLK PSSLMVNDGY
SPNRAAVRIS IRVLSGSCLP KPIGQRSGDC IDPYVKVSVF DIKNDEKESI ISYPTSIAHA
NGFFPIWSQE KFSFTIENWA VAMLQLTVYD KTKDEFIASS SIPVSCLRRG IRSVKLYDAT
NTRSGAFAFA SLLLDLKMGH VVAEI
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