Gene PHATRDRAFT_42638 details

Gene Information

• Locus tag: PHATRDRAFT_42638
• ID: 7196306
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 665743
• End bp: 670244
• Gene Length: 4502 bp
• Protein Length: 494 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002176626
• Protein GI: 219109745

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACCGACGTG TGCCGAGCTA GCCCTTCGTC GCGCACCACT CGACTCGCGA GACATCTTGG 
AACTATAGCT TGTGCGTCAT CTCTCTAGCG ATAGTGTGTG TGTGTGGGAG AGAGAGTGCC 
TGTTCCGGCG TCCAGGGGGG GGATCCACGG TCATCTAACT GGAAAGAACC ATTGTCGCAA 
TGCCGGAGAT GCCGTCGCCA CCACCGCACG TGTCCGTGTT GACTGCGGGA GGTGCGGGTC 
AACGTCGGAG TACGGGGTCC CGCGACCTCG CCACTACCCT GTCGTCTCCC CCCACAGTCC 
GGACGTTGAC GAAATCCATC CCGGCAGTAG CCAACGACGT GACCAGCGCC CACGCGCACT 
CACACCCACC TCCCACACAA GTCCAGAATC CCACCACACG CGATCCCCCA CCACCGGAAT 
CGCTCATTCT CGAAATGGAA GAGACGGAGG ACGACGCGGT CGCCTCCACC GACGTCCACG 
ACAATCCCTA CGCCAAAGCC CAGTCTGTCT CGCCGTTTCG AGATATTCCG CTCTCGGCCT 
CCACCGCGGC ACGCGCCGAC GAATCGTCCT TCCACGCCGG TCACCTGCTC GAACATTCCA 
AATCACACGA ACTCTTTTGG TTGACCGTAT GTTTCCTCGG TATCATGGCC AGCTTCGTTT 
GCTACGGATT GCTGTTGGAG TACACCACGT CGGGAGACCG AGAATTGCAC GAACTCAGCT 
TTCTCTTTGT CACCTCCGGC CTCTACACCC TCACGGCAGC CGCCGGACGA TACGTACGGG 
ACGAAACACC CTCCACCATT CCGCCAGCAC GCTTCGCCAT ACTCGGACTC ACCTCCATGG 
GATCCACCTT TTGCTCCGTA CGATCCCTCC GGTACGTGGC ACGGGAACAA TATTCACTAT 
TTGTGGCTTG CGCGCACACA CACTTCCACT CACACACACA ACCTTTCTAC TTTTGGTACG 
CAGATACGTC ATTTATCCCA TCCAAGTGCT CGCCAAGAGC TGCAAACCGG TCCCCGTCAT 
GATTATGGGA GCGTTCATGG GCAAACATTG TACGTGACCG CCAGAGCGAA CGAACCGCTC 
ACAAAAAGTC TACTGCCGAG TCGCCGGATG CTCATTCACA ATACCCCCAT TTATTTTTAA 
CAATTTGCTT GTCACTGACA CACAGATCCC CTCCGCAAGT ACATTAACGT GGTCATGATT 
GTCGCCGGCG TTGCCCTCTT TATGGGAGGT GGCGACGGCG ACAACAAGAA GAAGAGTGCC 
AACCAGAGCG AGGACGAAGG CTCGACCGCC CAACTTATTG GTATTCTCCT ACTGTTCGTC 
AGTCTCTGTT TCGACGGTGG TACCGGGGCC TACGAAGACA AACTCATGAG CGTCCATTCC 
GTACAGCCCT TCGATCTCAT GTACAACATA CAACTCGGCA AGACCATACT CGCCGGCGTG 
GCACTTCTCG TACTTAATCA ACTCCACATA TTCCTACAAA TGGTCCAAGA CATGGGCTTT 
CTCCTCGTGG CACTCGGTCT CAGCGGCGCG CTCGGACAAG TCTTTATCTT TGTCACGATT 
GCCAAATTCG GAGCCCTAAC CTGCAGTATC ATTGGACTCG CCCGCAAGGT TACCACCCTC 
GTGGCGAGTA TATACTTTTA CGGACACGTC CTCAACGGCG TCCAATTCCT CGGATTGTGC 
ATCTCCGTTA CCGCCATGGT ACTCAACTTT TGGGGTAAAA AGGGTGGGGG CGGGCATCAC 
GCCGGTGGGC CGTCCGGAGC CGGCGCACCC TTGCACGCGG ACACCGAAAC GGAAAAGCTG 
GTCCGGGAAG ACTCGGGCGA CGCGCACGTG GAACTGACAG TGGCACCCCA GACTTCCAAA 
GAGTTGGTGT AGCAAAAAAT CAGTGGCACG TTGTTTCCAC GCTCCGTCGA ATCACCGCAC 
AACATACAGC ACTGTCGACA ATAATAATAC ATATATTTCT TTCCTTGTTT TGCGCATAGT 
ATCCTCTGTT ACGGTGATCA GAACGAATGC TGAATGCTTG ATTTCATTTT AGAAGGTTAC 
TCTGCCGTAC TAATTTGTTC GGAGGGCGTG CGTCGAGTAA CAAGAAACGG CTGGCTGCGC 
GTACCAAAGT TCCTTGGGAA GATGTATTTT GTGTAGCTCC TGTCGGTCCC CGCCTGCTGT 
CGCAACTGCG GGTGTTGATA AGGCGCGCAC AAGTTCCGTA TGCCTGTTGT TGGTTTAGTG 
GTGTGTAGAA ATAGCTTGGT CATACCGGAA CGATTCGATC GAAACTTAAA GTGGTCGTAT 
TCCGCCACAG CAAGTTCTTG TCTATCCTTA ATCTTCTTCA TCCAGACCCG AGCAATGCAG 
GATTCTGGCG AAGGAGTTCA AATGTAAGGG AAAGTGGTAA TTCATCCTGC ACATGAGAGT 
TTCGCTTGCA TTCCGTTGCA ACTGCCGTCG CTTGGAGGAA GGGGTACAGC TTGGAAACAC 
CATCGCGCCG TTGAAGTGAT TCAGGGTTCA AATGTACAAG TCGCTGCAAA AGTTCAAGCA 
TGCCTTGTAG TAAAGACTCT TTGGTGGATC GGGCTGGTCG GGAACACGCG CGAGCAAACG 
TGTCAACGAC GTGATGGATA ACCAGCCGAC CACCGTTGTC GGCGACTCGA GCAGTTTCTG 
GACGTGACAA ATCCAAGGCT GTCCGTAGGA CGCCCAACGA CTCCCGCAGC AGAATTCTAG 
CTGCGTGCGG CTCCCCTACG TTGTCGTCGC GAGGCCAGTC CCACGCATGC CAAACGCGGC 
TCGCGGCATA GTGGACCGGC AATCGACCAC GATTGTCAAC AACATCCAGT TCTTCCGGAA 
ACATCGATGC AACAATATAG ACAATGGCAG CGAGGCAACT TGGAGTGGCA AACGCTATGT 
GCACCAGAGT CGATTCGCCA ATCGGAGCAT TTCTGCGTCC CATTGTGGCG GCTTGCAACA 
TGGAAACAAC CTTAGTCCAG AACAAACTAA CAACAACTTC CCGGCGATTC CAAATCGTTG 
TTGCTGGCGG TTCCTCCCCA TAATTTACCA TCCCCTGCCG AGAGTCGTAT CTTGCACGAA 
TAATGCGCAA TACTTCGACA GACCGTTTTG CCCACTGCAA AGACTCCAAA TCCCCCAAGA 
CTTCTAGTGG TATGTGTCTC ATCCGCAAAA AGTCCACCGG AGGGTCCATC CTCTTGATCA 
GTTGCAGATC CGAATCAAAA TCGCCCTGCT CCAACGCAGT AAAGGCATCG TAGCGCGAAA 
GCATTTGTCC GTTGTATTCG TTAGACGGCA AGGCAATTTC TGTAGTAGTA TCTGCACCCC 
GAACATCGAT GACGAGCAAG GAGCTGACAA ACCGCACCCA TAGCCAGTGC AGAGGTGTCA 
AGCCGGACGC ATCCCGCTTG AGCACGGCTT CCGGTGCGGC TTTGGCAATG AGTGCGACGG 
AGCGCGGTCG TTCGCCCCGC ATGGCGCAAA AGTGGAGGGG ATTCTCTCCC TGTGTATTGC 
TTAGGAAGGC AGCCTTGGTT GCCGGTGACG TCGCTTGGGC ACGCTCCGTG TCGAGCAATA 
ACCCAATGGT GTTGGTGTGT CGTCCGTGAA AGACAGCGGA ATGCAAGGCC GTATACTGCC 
CTCGGTAACC GGTGAAAACA CAACTAGCCG CTTGAGGACA ATAGCGAAGC ATACAGGCAA 
CCATCTCGTA AATTTGACGC TCCACTAAAA AATCATCTTC GGCACCGAGT GAAGGAGCAT 
AGATGTTGGC CTTGATAGCA TACACGATAG GGGGCTCTTC GTATTCGCCC CGGTCCGGTA 
TGATAACGGC CTCGGGACAA GATCGAACGA GCATATCGAG GATGGGTAAA AGATCACCTG 
AGTCGGACTG TAAGATATTT GATTGAAATC GTCGTCGGAT CAAGAGGTGG AGAGGCGTAA 
ATCCGTCAAC GTCTTGTGAC AAGGCTACTC TGTTACTTGG CGTCGCTGTT GCGGTATCAC 
TACCTTGTTC CTCTTCTAGG GCATCGTCAG CCCTCAGCAA GGCGGCGATC TCGTTAGCCC 
CCATGCGTTC ACAGACAATG GCTTCATGTA ACGGAGATCC CCGTGAGTCC AACACGTGAC 
GCAACTTGGA GGGTGCCGCG TGCAAAATCG CCTCCAAGCA TTTCAAGGGC GCTCCCAGAC 
GACACGCCAA GGCCAAGCAT GAGGGGTCTA CGTCCGCACG AGCCGCTTCC TCGGGGTAAA 
GCTGTACACG CTCCGTTGCT TCATCCCATA ATGAAGCTTC CAATAACGCG CTCAGGTGAA 
TGGGCTTATC TATCGTTGCT TTCATTGGGC AACGCCTTGC AGGAGCTGTG CCGCTGCTAG 
TGCTTTCCAC TCGAGGACGT TTCGACGATC GAGATGTTGT AGGGAAGGAT GGGATCTCCA 
TCGCCCCTTT GGATCCTGAA CTATCCACTT GGTATCAAAG GCGTGGATTG TACAACAAAC 
ACCCCGTGGA TGGATGGATT GACTCGCGCT TCAATCCACT GTTGTGGTAG GGCAACGCAG 
AG 

 

Protein sequence

MPEMPSPPPH VSVLTAGGAG QRRSTGSRDL ATTLSSPPTV RTLTKSIPAV ANDVTSAHAH 
SHPPPTQVQN PTTRDPPPPE SLILEMEETE DDAVASTDVH DNPYAKAQSV SPFRDIPLSA 
STAARADESS FHAGHLLEHS KSHELFWLTV CFLGIMASFV CYGLLLEYTT SGDRELHELS 
FLFVTSGLYT LTAAAGRYVR DETPSTIPPA RFAILGLTSM GSTFCSVRSL RYVIYPIQVL 
AKSCKPVPVM IMGAFMGKHY PLRKYINVVM IVAGVALFMG GGDGDNKKKS ANQSEDEGST 
AQLIGILLLF VSLCFDGGTG AYEDKLMSVH SVQPFDLMYN IQLGKTILAG VALLVLNQLH 
IFLQMVQDMG FLLVALGLSG ALGQVFIFVT IAKFGALTCS IIGLARKVTT LVASIYFYGH 
VLNGVQFLGL CISVTAMVLN FWGKKGGGGH HAGGPSGAGA PLHADTETEK LVREDSGDAH 
VELTVAPQTS KELV