| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42601 |
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| Symbol | |
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| ID | 7195970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 554148 |
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| End bp | 555954 |
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| Gene Length | 1807 bp |
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| Protein Length | 531 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177109 |
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| Protein GI | 219110715 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTAACTGTCG CAGTCACACA TTTTAGCAGA TGCAATTGCC AGCAAAATAA ACGACCATCC
GTAACGACTA CTTGGCATAG TACATTAGGA GATCGTTTTC CAAATCGAAC GTTTCACAAT
TTCCTGTTTG TCTGGGCAGA ATCAAGTTTA GGTCGTAGCA AGAGCGTCGG TGAATCGGAT
CCGATGGCTT CCGTTTGTAG ACTCTCTTTT GCAATTGTGT ACTGTTTAAG TGCATGGTCT
TACACTGTGG AGAGTTTTCT TGCACCTCAG TTCTCCAATC TTAAACCCCT CGGTGTCTCC
ACACTCGCTG CGTCGTCGAC GGCAGAGGTT ATATCGAATG CAGCTTCTAG CTTGGAAAAT
TCTTTAGCGG CGGTACAAAA GGATATCTGC AAGACGCTGA AGGTCACCGT CGCACCGTCT
TCTGTGAATC GGCTAGGTCT AGTGGCGACT GAGAAGATTA GAAAAGGTGA GGTCTTCTTG
GCCATGCCGT ATGATGTACG CTATGAACTT TCCGCGGATC TTGCGCGCAA CGTCGTGTTC
AAAGACGTAC TTTCAGAAGA CTATAATAGC TGGACAGGTG ATGCTGGCTT GATTGCTTTA
CTAATTCTGA ACGAAGTTTG CCTAGCTGCA GACACCGGTC TAGGGACGAA GGAACCTATT
CGTCAGAACT CGCTCCAAGC TTTTATGAGC GCGTGGGTTG CGGCACTTCC AGGTCCAGAG
GACATCAATC ATCCTTTGCT GTGGTCCGAA GAAGACCAGG AGATTTTGCA ATCCTCATCC
ACAAATCGAA TCTATCGCGT TTTGGATGAT ATAGAAGAAG ACGTAACGTG GCTGAAGACG
AACGTTTTCG AGAAAGATGG CAACCGGTTC CCTGTATCGA TTCCATGGAA TGGCGAAGAA
ATCCCTTGTT TTTCGCTGAC AGGCTTCAAG TGGGCAATGG CTTTGGCTCA ATCAAGATCC
TTTTTTGTAG ATAACGCTGT CCGTCTCCTT CCCTTAATGG ATTTCTGTAA CCACGCGGAC
GAAGGCACGG AGGAAGCGCG TGCGGGCTTT ATGGGAACCT TTGGTACAAC GAAAGGGGCG
GAATTGGTTG CGGGCCAGAG TTACGAGGTG GGCGAGGAAG TCTTCATCTG CTACGGCCCC
AAAAGCGCTG CCGACTATTT GTTGGAGCAT GCATTTTGTC CAGAACAAAG TTGGAAAACT
GCTGTTTCAG AATTGTTTTT TGAAGTTGAC CCCAAAGATC GCTTCTACGA CGACAAGCTG
GATATACTTG AATTCGAAAC TTATGATGCA TCCCCGATGG ACCCCGTTCA ATCCTTTGAT
GTGGTGAGTG CGCCTGGAAG AGATGGTGAA CCAGACCCTT TTATGGTTCA ATTTGTTCGA
CTTTGCAAGC TGGGTGCGAC GGATGCATTT CTCCTCGAGA GCATCTTCCG CAAAGAAGTC
TGGGGATTTA TGGAGCTTCC CGTAAGTGAA ACAAATGAGC GAGATGTTGT TGATGCAATC
ATGGAGGCTT GCCAGCTTGC ATTGGACGAT TTTTCAAAAT GTGCGGAAGG TGGCCCAGAG
ATTTGCAGCA AACTACGAGA GTCGGAAAGC CAGGCGTTAA TAAGAACGAG AGACTTTTTG
CGACGGGATC GAGAGGCTTT GGACCTGAAA GAGTACTACC AGCAAAGACG GTTGAAGGAC
TTGGGTCTCG ACTCCGAGTG GTCTCCTGAA GATGATATGA GTCCTGACCT TGGATTTGGG
CAAAGTCGAG CCCCAGGCGG TGCCGATTAC GATTGGTAAA AACTGAAATT TTCCCTTTAC
TCATTTG
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| Protein sequence | MASVCRLSFA IVYCLSAWSY TVESFLAPQF SNLKPLGVST LAASSTAEVI SNAASSLENS
LAAVQKDICK TLKVTVAPSS VNRLGLVATE KIRKGEVFLA MPYDVRYELS ADLARNVVFK
DVLSEDYNSW TGDAGLIALL ILNEVCLAAD TGLGTKEPIR QNSLQAFMSA WVAALPGPED
INHPLLWSEE DQEILQSSST NRIYRVLDDI EEDVTWLKTN VFEKDGNRFP VSIPWNGEEI
PCFSLTGFKW AMALAQSRSF FVDNAVRLLP LMDFCNHADE GTEEARAGFM GTFGTTKGAE
LVAGQSYEVG EEVFICYGPK SAADYLLEHA FCPEQSWKTA VSELFFEVDP KDRFYDDKLD
ILEFETYDAS PMDPVQSFDV VSAPGRDGEP DPFMVQFVRL CKLGATDAFL LESIFRKEVW
GFMELPVSET NERDVVDAIM EACQLALDDF SKCAEGGPEI CSKLRESESQ ALIRTRDFLR
RDREALDLKE YYQQRRLKDL GLDSEWSPED DMSPDLGFGQ SRAPGGADYD W
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