| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42574 |
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| Symbol | |
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| ID | 7195955 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 474293 |
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| End bp | 476744 |
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| Gene Length | 2452 bp |
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| Protein Length | 705 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176590 |
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| Protein GI | 219109672 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGGAAATCC CCAAGCATCA CATAATAAGC AAGTCTCCCA GCAAAGAACT GTTCGAGGCA
TTATCAATCA ATATGAAACT TGTTGTCTCT GCCTTGTTCT TCTTGTCCCT GGCGGAAGCC
GATTTGTTCA ACTATGGCAA CACGGACACC ACTGTCGATG GCGAGAAAAG TTACGGAATG
CCGAATTGGA ATCGAGTTGA ATGCAGCAAC GAAGACACCT GTGTGAGTGC GCAATTTTCT
TAAAACATTT AACATATGGG TCTGTTGCTC ATTACTTGCT TTTTTTTTTG CCTTTACAGC
GAGGCTGGCC CGACAAGTTT CCCTTTTTGG TAGGCTGGGA CGCGGGCAGA AACACCTGTC
AGTGGTGCCC TGAAGGTGGA CCAGAGAATT GTGGTTTTCA CAGACAATCA CCGATTGATT
TGAAGCGCGA CCGGGGGGTG ATCGGCGGAA GCAACGAGAA ATCATGCCCA GATTGGCATT
GGATGGCGTA CAAGGACGAT ACTTGTGCAT GGAAAGATAT GGTGGATGAA TTTTCGATTG
AACGTCACGG TTTGCGTCTG TCAGTCCCCA TTGAATCAGA CGGTGAAATT TCTTGTGTTG
AAAATCGAAA TGGACAAGAT GTGAGGAGGT TTCCTCGTCT AGATTACAGC AAAGGTTTCC
CGGATTGGTG GTGGCTCCAA TCGACCGACA TATCTGTACC CAGCCATCAT ACACAAGAGG
GAAAGAGATA CGACGCCGAA GTCACACTTA AGCATTTCTA CGAGATTGAA CATGACAAAA
ATCAGGTATG AAGCGCATCC AATACTTCTG TACTTAGTAG TACCGAAACC TAACGTGAAT
CTTTTCTGGT CTTATCAGCT CGGCTATGTA ACTCTCTTTA TGGAAGCCTA CGACGATGCA
GAGTCATGGC CGTTTTTAGA CAAACTGATT TGTGCCTGGA GAGAAAAGGA GGAGAAGGTC
CGGCGTGAAT GTGGACTTCC GCCTTCAGCT CCGTACGGTA GATGTCGAAT CTTTTCTGAA
CGTGGTCAGC AGCCAACTGA TGCTTGGAGA TTCGAAGCTG GTGAGCTACA GTCTTTTGGA
GAGGGTGAAC CCGCCCCGGT TCCATCCGTT GCCCCCACCA AATCACCAAC TGCCTCGATC
ACTACCTTGT CTCCTGTAAT TCCGACTACG TCACGTCCAA CCGAGTGGGT CTTACCTCCT
ATCTTTGCAC CCCCTTCCGT CACCGTCACC ACCGACACGC CAACCATCAC TGAGCAAATT
GTTTCGGCAC CTCCGCCTAT TGACTGTGAT GCATTTGATA TGAACTATGA TAGGCTTTGC
TACTCCAACG ATCCTTGTTG TGAAACCCAG AGGTCAACTT CCGAGTATTG CTGGGACGCT
TATGAGAACA TTTTCCCAGG AAATGCCATC TACTCGGCTT GTCACCATTG TTGTGGAGGA
GAACGAAAGA GCGTTGGACC GCCTAGTCCC ATCAACCCCA AAATTCCAAA AACGTTACAA
TGTTCGTCGT TGTCGAACGA ACCAAACCGC ATGTGCAATC TTGAAAGCTG TTGCGATGGT
TCCGACTCCA GCTACTGTCG GGATGTTCAG AAGCAGTTCG GAGACAAAAT GACTGAAATC
TGCGTACGTA TTGATAACAG TTGATGGAGT TGATTCGAAG TATTCCGCTG ACCGCGTGTT
TCCTTTTCTT GCAGTGGTAT TGCTGCTCAG AGCCGAAGGA GTATGATTCC AACAGACGAA
CGCTTCGCGG AACAAGTTTT GGCATGGAGG TCGGCGAAGA CATCAAAGGT GTGCAGTCTT
TCCCAAGTGG TACTAAGTTT ATGGAGGTGG ACGGCCGCCG GCTTGTTTTG CGGAAAGAAA
ATTTTGAAAG GGATGAAGAG AGCGAGGAAG ATTATTTCAA TCGGATCTAT TCAAATTACA
AGCACCGGTC CTTACAAGCC ACTGTCCATC AAGAGGACTA TGCTGACATC GAGTACTGGC
CGTACGAATG GATGCTGAAG GTAAATACCG AGTATTACTT CAGATACGAA GGTACTCAGG
TAGTTGCCCC GTGCGCAGAA ACTGTCCATT GGAGAGCTAT GAAAGATCCT ATTAAAATTC
ATCCTCGCCA GCTTGCCGAG TTGACAAGGC TTTTGAAAGA AAGAATCGCC CCCACAGGAG
ATCCCAATTC TTGTCAATCG GACACTGCAG GCGTTTCCGG AAGTGACGGT TCACTCAAAC
TGAACAGAGA CCTTCAGTAC TACCACAATG TCCATCGCAA GGTATTTTGC GAGTGCAAAG
ACTGGCCCTC AAAGTTCGAA AGTGACAAGC AGTGGTGCCG CAATTGGCAA GATGACACCA
ATTACGAGCG GTTTTACCAG CGTCCTTATA GTTTCGATTC AAATGGAGAG TGGTAAAGCA
GGTTGTTTGA TAAAATACTC TATATAACGT TAAATGGAAT GATGTAAGCT TT
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| Protein sequence | MKLVVSALFF LSLAEADLFN YGNTDTTVDG EKSYGMPNWN RVECSNEDTC RGWPDKFPFL
VGWDAGRNTC QWCPEGGPEN CGFHRQSPID LKRDRGVIGG SNEKSCPDWH WMAYKDDTCA
WKDMVDEFSI ERHGLRLSVP IESDGEISCV ENRNGQDVRR FPRLDYSKGF PDWWWLQSTD
ISVPSHHTQE GKRYDAEVTL KHFYEIEHDK NQLGYVTLFM EAYDDAESWP FLDKLICAWR
EKEEKVRREC GLPPSAPYGR CRIFSERGQQ PTDAWRFEAG ELQSFGEGEP APVPSVAPTK
SPTASITTLS PVIPTTSRPT EWVLPPIFAP PSVTVTTDTP TITEQIVSAP PPIDCDAFDM
NYDRLCYSND PCCETQRSTS EYCWDAYENI FPGNAIYSAC HHCCGGERKS VGPPSPINPK
IPKTLQCSSL SNEPNRMCNL ESCCDGSDSS YCRDLMELIR SIPLTACFLF LQWYCCSEPK
EYDSNRRTLR GTSFGMEVGE DIKGVQSFPS GTKFMEVDGR RLVLRKENFE RDEESEEDYF
NRIYSNYKHR SLQATVHQED YADIEYWPYE WMLKVNTEYY FRYEGTQVVA PCAETVHWRA
MKDPIKIHPR QLAELTRLLK ERIAPTGDPN SCQSDTAGVS GSDGSLKLNR DLQYYHNVHR
KVFCECKDWP SKFESDKQWC RNWQDDTNYE RFYQRPYSFD SNGEW
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