Gene PHATRDRAFT_42566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42566 
Symbol 
ID7196266 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp449743 
End bp450812 
Gene Length1070 bp 
Protein Length220 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176586 
Protein GI219109664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000723214 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCCCACCAC AGCTATTCGG AAAAGACTCA CGATGAAGTT CACTGCTGCC ATTACGCTTG 
CCTTTGCTGC CTCTGTCAGT GCCTACGATG TCCCTAGCTT GACTCCGGAC AACTACGAGT
CTGTGACCGA AGGAAAGACC GTCTTTATCA AATTCTTTGC CCCGTGGGTA AGTACCATGG
ATCCAAGCCT GTGACTTTTG CGTGTCCCGC GTAAAGGGTG TACCAGAGCT ACGTGAAACC
GGCAGATTCC CAAGAGTTCG AGGATGCGCT GTGCCCAGGA GCGACAGTGT TTGTCAGGGA
ATGTGATAAT GGCGTGTCTT ATCTTTAGAT CACGGCTGAT GCACAACGAC AACGGTTACT
CGGTTTCAAA CACACTGTTG TGATTTGGTC GTGCAAGAAT GGTCGCTCGT TCTCGGTCAT
TGCACGTGCG TGATTGGATT ACACCTTTTA GGGAGAATCG CCGTTGCAAT TATCAGCCTA
AACTCACGAC ATTGACTTTG TTGGTTTCTG TAGTGTGGAC ACTGCAAGAA GATGGCTCCG
GACTGGGAGA AGCTTGCCGA AGAATGGGAC GGACATGCTG TTGGTCTTAT TGCCGAAGTC
GACTGCACGA CCGAGGGCAA GCCGCTGTGC GATGCCAACG GTGTCCGTGG ATTCCCTACT
CTCAAATACG GTGACCCGGC CGGTTTGGAG GACTACCAAG GTAGCCGCTC TTTCGACGAT
TTGGCCACCT TTGCCAAGGA AAACTTGAAG CCTGTCTGCT CTCCCGCTAA CCTAGACCTG
TGCGACGACG AGAAGAAGAA GCAGATCGAA GATTACATGG CGCTCTCCGA CGATGACCTT
GAATCGAAAA TTAAGGCAGA GGAAGAAAAG CTCGAAGCGG CTGAAGCGGA GTTCAAGGAA
GCCGTTACCA AGCTCCAAGC CGACTACCAG AAGCTTTCGG AAGACAAGGA CGAGAAGATC
GCTGCCGTGA AGAACTCCGG CCTGGGTCTG CTGAAGTCTG TCAAGGCCTC CAAGAGCAAG
ACCGCCAAGG AAGAATTGTA AATGTCTAAT ACATTTATTC TTTATACACG
 
Protein sequence
MKFTAAITLA FAASVSAYDV PSLTPDNYES VTEGKTVFIK FFAPWCGHCK KMAPDWEKLA 
EEWDGHAVGL IAEVDCTTEG KPLCDANGVR GFPTLKYGDP AGLEDYQGSR SFDDLATFAK
ENLKPVCSPA NLDLCDDEKK KQIEDYMALS DDDLESKIKA EEEKLEAAEA EFKEAVTKLQ
ADYQKLSEDK DEKIAAVKNS GLGLLKSVKA SKSKTAKEEL