| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42552 |
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| Symbol | |
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| ID | 7196258 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 395498 |
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| End bp | 397188 |
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| Gene Length | 1691 bp |
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| Protein Length | 526 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177082 |
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| Protein GI | 219110661 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAATCGCTCC ATGGACCAGC AAGTTATCCA AGAAGTATGA ATGGTTGTAA TGGAGGTTAT
CCTACCTTAT CTCCGTACGT TGGCAACGAT TTCGGGGCAA CGCCTCGAAC CACGCACATG
AATAGGTCAC CTCCACTTCA TCATGTTGTG CACACCGGCG GGTCTTCACC GGACCACTTG
ATCCCATATT GGAAGCCCAC ACATAACCAG TATATTTCTT CCCCTGTACC ACGTCCTTTA
AAAGAGTCGT CTCCAATAAC CAACATTCAA TCCGAAAGTG AAAGAGACTT CTCCTCGCCT
CGGACTCTCC CTTCCTATTG TTCGAGGTCT TTCGATAGCC CCCCGGATCC TAACACGACG
GAACGCTTGA TGTCATCTAC CATGCAAAAG CGCGTCTCGC CCAAGGAAGC CCGAAACAAT
GTCCCCGAGA CGAGTGTACC CTTGAAAAAG CGAAAGACTG TGATGCAGAT GCATCGCAAC
CCCGTGGTAT CACCTTTTCA CGCCAGTCCA ATATCTCATA GTAGTAAGGC GGTCGCCTCT
ATCTCACTGT CTTCTAATCG AATCCCATCA TACGACAGTC GGGTATCATC ATACGACTCT
AAAGACGGAC AAGCCCTTCT AGAAAGTTCC AAGATCGTGG ATCCGACGGA CATTAAGGCG
GAGGAACCTG GAATGAAAGA CTTTCCTAAT GTCTTACATA GCGTACTTTC AGATTCCGAA
TTTGCCGGAA AAGTTGTGCA ATGGCTGCCG CATGGGAAGG CTTGGAGGAT TGTACGATTT
GACGCTCTCA GGAAGCTGGT GCTGCCGAAG TTTTTCGCCA ACCTTCGCCA ACCTAACAAT
AACGAAACAA CCGGTTCCAT CGACACTTTC CTCAAGTATC TTTCTTCCTG GGGATTCGAG
GAAGTTACTG ATGGCCCTGA CGTTGGTGCA TACACTAATG TGGTAAGTAT CTAATTTCAA
GTTTTCAAAT GGGAGAGATA ACGTGGACCC TCATACCAAC TCCATTCTTG TCGCAGCTCT
TCCGACGTGG CCTTCGTCGG CTTTGCTCCG AAATGAAGTT CAAACCTTGG GGAAAGGAAG
ACTCAATACA GATAATTGAA TCATCGAAAC AGCCTCAATC GATTCTTCGT GTGCCTTCGC
TTGCGTCAAC GGTGGATACG TTGGAATGCA CCTCAAGCAA AGAGATGGAT GGTCAGTTTG
TTCAAATGAA CCCTTCGGGT AGCTCAGAGC GTCCGGAGTC GTGGCGCACC AACCAGTGGG
AAAGATCTCC TGATAATCGA TTTCTCCGAC AGACACCACC GTCTGAAGCA TGGCCATGCA
ACTATCAATC TGCCGTTTCG AACAGCTTTA AAGGGTCGGA ACAATCACGG AATATTCAAT
ATTCTCCAGT GCGTATACGT TCCTCTCGTG GAGCGCCTCG CACTTTGAGC AGAACGAAAG
CACCCGCTCA GTATCAGAAC CACCCACAGC TTCAAAAGCG TCCATGTGCC TTCCCAGTAT
CTAATCGTGG CCGTGGAAAG GTATGGAGCC CTCGTCCATT CTCTCCGTCC GTTCACCCGT
CGACATCTCC AGTTTCAATT GAGACAAATG TTATGTCAAT CGGTCAATCA CGCTCGACTC
TCAACCGTAA GGAGCCACTG GCGTCCTCAC CGGAAGAAAC GATACGAGGA GAAAACGTCA
CTGCTGTGTA G
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| Protein sequence | MNGCNGGYPT LSPYVGNDFG ATPRTTHMNR SPPLHHVVHT GGSSPDHLIP YWKPTHNQYI
SSPVPRPLKE SSPITNIQSE SERDFSSPRT LPSYCSRSFD SPPDPNTTER LMSSTMQKRV
SPKEARNNVP ETSVPLKKRK TVMQMHRNPV VSPFHASPIS HSSKAVASIS LSSNRIPSYD
SRVSSYDSKD GQALLESSKI VDPTDIKAEE PGMKDFPNVL HSVLSDSEFA GKVVQWLPHG
KAWRIVRFDA LRKLVLPKFF ANLRQPNNNE TTGSIDTFLK YLSSWGFEEV TDGPDVGAYT
NVLFRRGLRR LCSEMKFKPW GKEDSIQIIE SSKQPQSILR VPSLASTVDT LECTSSKEMD
GQFVQMNPSG SSERPESWRT NQWERSPDNR FLRQTPPSEA WPCNYQSAVS NSFKGSEQSR
NIQYSPVRIR SSRGAPRTLS RTKAPAQYQN HPQLQKRPCA FPVSNRGRGK VWSPRPFSPS
VHPSTSPVSI ETNVMSIGQS RSTLNRKEPL ASSPEETIRG ENVTAV
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