Gene PHATRDRAFT_42539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42539 
SymbolhCDK2 
ID7196701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp363179 
End bp364264 
Gene Length1086 bp 
Protein Length347 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177075 
Protein GI219110647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCGACAAAG GCTGGCAGGA GCAAACGTGA CACAAATGTA AGATGGAGAT CAGAAAAAGA 
GCAAGAGATC AGAAAGCGGG TTCCGAAGTG GACGGCCGTA ACAGACGGGA GACTGCGAAT
GGACGCTCCG TCAACGTTTC GGACTTGTAC GAAAAGATTG GTCGCGTTGG TGAAGGAACT
TACGGGATTG TCTACAAAGC ACGAAATCTC CAAACAAAAG AGTACGTCGC GCTGAAACGA
TGTATTCCAC ACAACGAATC AAGTGATGGT TTTCCGGTCA CTACTCTTCG AGAAATCCAA
TCTTTGCGAA TTTGCGGTAG GCACCCCAAC GTTGTCGCAC TGGAAACAGT TGCCGTTTCG
AAGAATGGCG TTTTTCTCGT GTTTGAATTT TGCGAGCACG ATCTTGCGGA TCTAATCGAT
CGGCACTATC AAAAGCATAA AAAAAGCCCT TTTCGAGAAT CCTCTGTCAA AACACTTCTG
ATCCAGCTTC TTGGTGCCTT GGATTATGTG CATTGCCATC ATTTGATTCA CCGAGATCTC
AAATTGAGCA ATTTGTTGTA TACCCGACGA GGGGTTTTGA AACTCGCCGA TTTTGGTTTG
TCGCGCCCAT TTTCTTCCAG TGGCAACAAC GCAGCGCTCA CACCGCAAGT CGCTTCTCTC
TGGTACCGTC CTCCCGAACT ACTCCTAGGA AGCAGGCAAT ATACGCAATC AATTGACATA
TGGGCTACGG GATGCATATT TGCAGAGTTC TTGCAGGGAA TGCCACTATT AAATGGAAAA
ACAGAAGCAG ATCAGTTGAA TAGGATGTTT CACACCCTCG GCGTTCCAGA CGATCTCGAA
TGGCCTGATC TACCGGCGAT GCCTCTTCTT CAAGACGGCA CCATCAGGCT TCCTGACAGA
CAAACAAGTC TCAATACGTT ATTGGATACA TTTGCTTTTC TGTCGACAGA AGGTCTTCGC
CTTCTCTGCA CATTGCTTCG GTATGATCCG AACAGGCGAG GAACCGCTCG ACAAGCTTTA
ACATCCCACT ATTTTTCGGA CCTGCCTTTG CCCACTACCG AAGCAGACAT GCCGAAATTT
CGGTAA
 
Protein sequence
MEIRKRARDQ KAGSEVDGRN RRETANGRSV NVSDLYEKIG RVGEGTYGIV YKARNLQTKE 
YVALKRCIPH NESSDGFPVT TLREIQSLRI CGRHPNVVAL ETVAVSKNGV FLVFEFCEHD
LADLIDRHYQ KHKKSPFRES SVKTLLIQLL GALDYVHCHH LIHRDLKLSN LLYTRRGVLK
LADFGLSRPF SSSGNNAALT PQVASLWYRP PELLLGSRQY TQSIDIWATG CIFAEFLQGM
PLLNGKTEAD QLNRMFHTLG VPDDLEWPDL PAMPLLQDGT IRLPDRQTSL NTLLDTFAFL
STEGLRLLCT LLRYDPNRRG TARQALTSHY FSDLPLPTTE ADMPKFR